Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 ELL2P3-201ENST00000457883 1602 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL158163.1-201ENST00000603915 1649 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC092162.3-201ENST00000624511 1624 ntBASIC3.64□□□□□ -1.83
LMO4P61968 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 RNU6-236P-201ENST00000363886 106 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RNU4-51P-201ENST00000364206 140 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RPS26P8-201ENST00000393490 348 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 NRBF2P2-201ENST00000413087 861 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MTND4P22-201ENST00000413116 1169 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL121878.1-201ENST00000418638 859 ntBASIC3.64□□□□□ -1.83
LMO4P61968 TIMM9P2-201ENST00000419324 266 ntBASIC3.64□□□□□ -1.83
LMO4P61968 PTP4A1P5-201ENST00000420305 455 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC023128.2-201ENST00000420880 1223 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 MTCO3P30-201ENST00000426425 670 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.64□□□□□ -1.83
LMO4P61968 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 RPS26P2-201ENST00000440331 348 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO4P61968 ELOCP30-201ENST00000447108 299 ntBASIC3.64□□□□□ -1.83
LMO4P61968 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RPL31P3-201ENST00000458430 332 ntBASIC3.64□□□□□ -1.83
LMO4P61968 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 MTND4LP3-201ENST00000468320 276 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RPS3AP43-201ENST00000479743 781 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RN7SL812P-201ENST00000493791 279 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC108475.1-201ENST00000507880 950 ntBASIC3.64□□□□□ -1.83
LMO4P61968 ATP1B1P1-201ENST00000509767 915 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC008837.1-201ENST00000511513 412 ntBASIC3.64□□□□□ -1.83
LMO4P61968 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 AC138938.1-201ENST00000515431 782 ntBASIC3.64□□□□□ -1.83
LMO4P61968 RNA5SP446-201ENST00000515955 82 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 OR5AK3P-201ENST00000527486 1297 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AP003461.1-201ENST00000528866 78 ntBASIC3.64□□□□□ -1.83
LMO4P61968 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.64□□□□□ -1.83
LMO4P61968 AC008015.1-201ENST00000555505 465 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 AC007599.1-201ENST00000568688 1174 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL354943.1-201ENST00000572103 781 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.64□□□□□ -1.83
LMO4P61968 AC103987.3-201ENST00000582071 292 ntBASIC3.64□□□□□ -1.83
LMO4P61968 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.64□□□□□ -1.83
LMO4P61968 HMGB2P1-201ENST00000591146 634 ntBASIC3.64□□□□□ -1.83
LMO4P61968 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 AL020997.3-201ENST00000602843 359 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MRPS35P3-201ENST00000603189 709 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AL138478.1-201ENST00000612252 832 ntBASIC3.64□□□□□ -1.83
LMO4P61968 AC123768.4-201ENST00000616244 701 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MIR8069-1-201ENST00000616627 86 ntBASIC3.64□□□□□ -1.83
LMO4P61968 MIR8069-2-201ENST00000621412 86 ntBASIC3.64□□□□□ -1.83
LMO4P61968 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.64□□□□□ -1.83
LMO4P61968 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.64□□□□□ -1.83
LMO4P61968 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LMO4P61968 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 ZNF849P-201ENST00000594711 1566 ntBASIC3.63□□□□□ -1.83
LMO4P61968 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
LMO4P61968 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMO4P61968 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC3.63□□□□□ -1.83
LMO4P61968 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LMO4P61968 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LMO4P61968 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.63□□□□□ -1.83
LMO4P61968 MIR383-201ENST00000362257 73 ntBASIC3.63□□□□□ -1.83
LMO4P61968 RNU6-623P-201ENST00000363143 105 ntBASIC3.63□□□□□ -1.83
LMO4P61968 RNA5SP28-201ENST00000363841 119 ntBASIC3.63□□□□□ -1.83
LMO4P61968 RNU6-224P-201ENST00000384055 107 ntBASIC3.63□□□□□ -1.83
LMO4P61968 MIR921-201ENST00000401133 56 ntBASIC3.63□□□□□ -1.83
LMO4P61968 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO4P61968 RNU6-648P-201ENST00000410190 107 ntBASIC3.63□□□□□ -1.83
LMO4P61968 EIF4A1P3-201ENST00000411521 244 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC234782.4-201ENST00000417646 1048 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC062016.2-201ENST00000420950 676 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 RPF2P1-201ENST00000424137 906 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.63□□□□□ -1.83
LMO4P61968 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 ARL5AP2-201ENST00000444698 533 ntBASIC3.63□□□□□ -1.83
LMO4P61968 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC3.63□□□□□ -1.83
LMO4P61968 EEF1A1P1-201ENST00000447052 739 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms