Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S1P61966 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S1P61966 AC023598.1-201ENST00000472521 361 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 AC022336.1-201ENST00000475510 337 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S1P61966 AC106707.2-201ENST00000484182 374 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 HMGB3P14-201ENST00000494195 599 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S1P61966 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S1P61966 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S1P61966 HMGB1P23-201ENST00000518743 568 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S1P61966 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.62□□□□□ -1.83
AP1S1P61966 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.62□□□□□ -1.83
AP1S1P61966 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.62□□□□□ -1.83
AP1S1P61966 MIR4716-201ENST00000579628 84 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 AC006116.10-201ENST00000591836 581 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 SNORA51-201ENST00000606420 132 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 AC092628.2-201ENST00000622492 339 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
AP1S1P61966 AC244205.2-202ENST00000635781 342 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.62□□□□□ -1.83
AP1S1P61966 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 AC090337.1-201ENST00000579651 2074 ntBASIC3.62□□□□□ -1.83
AP1S1P61966 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
AP1S1P61966 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
AP1S1P61966 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S1P61966 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
AP1S1P61966 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S1P61966 AC006504.1-201ENST00000562493 3666 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 RNA5SP42-201ENST00000364278 115 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 RNU6-283P-201ENST00000364788 107 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S1P61966 AC092832.1-201ENST00000422934 400 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 ARF4P2-201ENST00000430209 526 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 HSPD1P21-201ENST00000436541 245 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 AL138787.1-202ENST00000437804 898 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 AC239367.2-201ENST00000447309 705 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 AL157884.3-201ENST00000448273 1184 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S1P61966 HMGN1P15-201ENST00000513870 295 ntBASIC3.61□□□□□ -1.83
AP1S1P61966 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S1P61966 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.61□□□□□ -1.83
AP1S1P61966 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S1P61966 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S1P61966 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.61□□□□□ -1.83
AP1S1P61966 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.61□□□□□ -1.83
AP1S1P61966 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
AP1S1P61966 MFSD8-236ENST00000641509 4050 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 CR381670.1-201ENST00000624291 1693 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 RNU1-85P-201ENST00000364127 164 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 RN7SKP27-201ENST00000410684 333 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 AC114814.2-201ENST00000419195 485 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S1P61966 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S1P61966 GOT2P5-201ENST00000433995 546 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 AC009263.1-201ENST00000441193 1239 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 RN7SL594P-201ENST00000470590 287 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 RPL21P129-201ENST00000491732 478 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S1P61966 IGKV2D-19-201ENST00000523346 262 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 AL121839.1-201ENST00000556233 1185 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.6□□□□□ -1.83
AP1S1P61966 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.6□□□□□ -1.83
AP1S1P61966 AC010200.2-201ENST00000605098 235 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S1P61966 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.6□□□□□ -1.83
AP1S1P61966 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.6□□□□□ -1.83
AP1S1P61966 AL122126.1-201ENST00000546905 1318 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 SYT14P1-202ENST00000600441 1448 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
AP1S1P61966 MFSD8-233ENST00000641482 4860 ntBASIC3.6□□□□□ -1.83
AP1S1P61966 PRO1804-201ENST00000623780 2050 ntBASIC3.59□□□□□ -1.83
AP1S1P61966 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
AP1S1P61966 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.59□□□□□ -1.83
AP1S1P61966 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms