Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-441P-201ENST00000384545 106 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RNA5SP241-201ENST00000391326 114 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPS3AP36-201ENST00000398190 775 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 DSTNP4-201ENST00000399472 474 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 PEX12P1-201ENST00000400284 1048 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 DBIP1-201ENST00000401435 260 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 HMGB1P17-201ENST00000403495 628 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RN7SKP266-201ENST00000410232 287 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 C1DP2-201ENST00000418167 426 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPL7AP49-201ENST00000429522 581 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC079807.1-201ENST00000429993 481 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AL591438.1-201ENST00000433508 581 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPL19P16-201ENST00000433839 588 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPL7P11-201ENST00000437586 658 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC073614.1-201ENST00000438690 650 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPS11P7-201ENST00000442125 465 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 VN1R34P-201ENST00000447387 883 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.78□□□□□ -1.64
CLRN1P58418 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC243772.1-201ENST00000451620 410 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.78□□□□□ -1.64
CLRN1P58418 BTF3P5-201ENST00000457252 467 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 MTCO3P2-201ENST00000457365 171 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC146507.1-201ENST00000468335 354 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RPL31P58-201ENST00000469001 379 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC100832.1-201ENST00000471945 383 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 ACTR3P3-201ENST00000480448 893 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 FAM172BP-201ENST00000487497 1089 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.78□□□□□ -1.64
CLRN1P58418 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AP004607.2-201ENST00000533949 322 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.78□□□□□ -1.64
CLRN1P58418 BGLT3-201ENST00000564523 994 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 MIR5186-201ENST00000577504 120 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 RN7SL290P-201ENST00000578661 300 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 MAGOH2P-202ENST00000584384 429 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC104695.2-201ENST00000605056 775 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 BCRP9-201ENST00000605312 388 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC091965.4-201ENST00000607691 587 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC069234.5-201ENST00000611056 416 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 AC072046.2-201ENST00000618366 268 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC124864.2-201ENST00000624736 186 ntBASIC4.78□□□□□ -1.64
CLRN1P58418 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.78□□□□□ -1.64
CLRN1P58418 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.78□□□□□ -1.64
CLRN1P58418 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
CLRN1P58418 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLRN1P58418 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 AC117529.2-201ENST00000512159 2068 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC093671.1-201ENST00000624981 2929 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.77□□□□□ -1.65
CLRN1P58418 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLRN1P58418 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 RN7SKP153-201ENST00000365026 316 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 OR1L6-202ENST00000373684 1044 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 SNORA17A-201ENST00000391185 133 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AL133388.1-201ENST00000404509 287 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AL512422.1-201ENST00000407033 553 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 MIR1305-201ENST00000408300 86 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.77□□□□□ -1.65
CLRN1P58418 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 AL445669.1-201ENST00000426743 755 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 BX890604.2-201ENST00000427883 474 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 RPL36P19-201ENST00000430744 301 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 SKP1P1-201ENST00000438081 489 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.77□□□□□ -1.65
CLRN1P58418 MTND5P14-201ENST00000441481 1267 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 OR7E125P-201ENST00000443450 846 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 PSPHP1-201ENST00000450062 261 ntBASIC4.77□□□□□ -1.65
CLRN1P58418 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 153.2 ms