Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MIR486-1-201ENST00000612171 68 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 RMST_10.1-201ENST00000616309 154 ntBASIC3.7□□□□□ -1.82
LIM2P55344 MIR6875-201ENST00000617506 72 ntBASIC3.7□□□□□ -1.82
LIM2P55344 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.7□□□□□ -1.82
LIM2P55344 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 AC024595.1-201ENST00000623088 387 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.7□□□□□ -1.82
LIM2P55344 U6.107-201ENST00000637108 79 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC083899.2-201ENST00000423285 1376 ntBASIC3.7□□□□□ -1.82
LIM2P55344 AC100871.1-201ENST00000507871 1456 ntBASIC3.7□□□□□ -1.82
LIM2P55344 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 UBE3AP2-201ENST00000429033 2259 ntBASIC3.7□□□□□ -1.82
LIM2P55344 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LIM2P55344 AC046144.1-201ENST00000478559 1853 ntBASIC3.69□□□□□ -1.82
LIM2P55344 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LIM2P55344 GCNT6-201ENST00000379591 934 ntBASIC3.69□□□□□ -1.82
LIM2P55344 OR52E6-202ENST00000379946 954 ntBASIC3.69□□□□□ -1.82
LIM2P55344 RNU6-213P-201ENST00000384051 104 ntBASIC3.69□□□□□ -1.82
LIM2P55344 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AP002784.2-201ENST00000397300 549 ntBASIC3.69□□□□□ -1.82
LIM2P55344 RN7SKP263-201ENST00000411194 309 ntBASIC3.69□□□□□ -1.82
LIM2P55344 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.69□□□□□ -1.82
LIM2P55344 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.69□□□□□ -1.82
LIM2P55344 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.69□□□□□ -1.82
LIM2P55344 AC068135.1-201ENST00000446164 246 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.69□□□□□ -1.82
LIM2P55344 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC3.69□□□□□ -1.82
LIM2P55344 AL035407.2-201ENST00000454090 378 ntBASIC3.69□□□□□ -1.82
LIM2P55344 RPL32P14-201ENST00000463196 378 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.69□□□□□ -1.82
LIM2P55344 AC093267.1-201ENST00000489176 961 ntBASIC3.69□□□□□ -1.82
LIM2P55344 BTF3L4P4-201ENST00000506381 449 ntBASIC3.69□□□□□ -1.82
LIM2P55344 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.69□□□□□ -1.82
LIM2P55344 AC010342.1-201ENST00000514047 877 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC010306.1-201ENST00000523223 1117 ntBASIC3.69□□□□□ -1.82
LIM2P55344 OR4A2P-201ENST00000527276 913 ntBASIC3.69□□□□□ -1.82
LIM2P55344 OR4A12P-201ENST00000530847 918 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.69□□□□□ -1.82
LIM2P55344 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.69□□□□□ -1.82
LIM2P55344 AP003717.3-201ENST00000544832 1180 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC090751.1-201ENST00000566966 267 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC015911.5-201ENST00000587076 451 ntBASIC3.69□□□□□ -1.82
LIM2P55344 NF1P5-201ENST00000588287 448 ntBASIC3.69□□□□□ -1.82
LIM2P55344 EIF1P6-201ENST00000600054 334 ntBASIC3.69□□□□□ -1.82
LIM2P55344 AC073530.2-201ENST00000623987 261 ntBASIC3.69□□□□□ -1.82
LIM2P55344 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIM2P55344 FAM35DP-201ENST00000323387 2712 ntBASIC3.69□□□□□ -1.82
LIM2P55344 FAM91A3P-201ENST00000456826 2544 ntBASIC3.69□□□□□ -1.82
LIM2P55344 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LIM2P55344 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LIM2P55344 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 ENSAP3-201ENST00000312710 333 ntBASIC3.68□□□□□ -1.82
LIM2P55344 RNU6-543P-201ENST00000362576 108 ntBASIC3.68□□□□□ -1.82
LIM2P55344 RNA5SP27-201ENST00000363839 119 ntBASIC3.68□□□□□ -1.82
LIM2P55344 RNA5SP515-201ENST00000364570 118 ntBASIC3.68□□□□□ -1.82
LIM2P55344 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
LIM2P55344 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 AC092745.2-202ENST00000411880 369 ntBASIC3.68□□□□□ -1.82
LIM2P55344 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIM2P55344 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 FABP5P3-201ENST00000437960 408 ntBASIC3.68□□□□□ -1.82
LIM2P55344 HMGB3P9-201ENST00000441799 583 ntBASIC3.68□□□□□ -1.82
LIM2P55344 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 RPS17P13-201ENST00000448974 407 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
LIM2P55344 FGF7P3-201ENST00000454645 303 ntBASIC3.68□□□□□ -1.82
LIM2P55344 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.68□□□□□ -1.82
LIM2P55344 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.68□□□□□ -1.82
LIM2P55344 TRBV8-2-201ENST00000475637 270 ntBASIC3.68□□□□□ -1.82
LIM2P55344 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 RNA5SP143-201ENST00000516936 115 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC083923.1-201ENST00000523708 376 ntBASIC3.68□□□□□ -1.82
LIM2P55344 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.68□□□□□ -1.82
LIM2P55344 AC092451.2-201ENST00000538746 658 ntBASIC3.68□□□□□ -1.82
LIM2P55344 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.68□□□□□ -1.82
LIM2P55344 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.68□□□□□ -1.82
LIM2P55344 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 MIR4286-201ENST00000580651 93 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.68□□□□□ -1.82
LIM2P55344 AC053481.4-201ENST00000583164 216 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC015726.1-201ENST00000602353 681 ntBASIC3.68□□□□□ -1.82
LIM2P55344 NTAN1P1-201ENST00000603150 646 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC005776.1-201ENST00000603164 290 ntBASIC3.68□□□□□ -1.82
LIM2P55344 MTATP6P2-201ENST00000603319 678 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AC021851.1-201ENST00000608537 1082 ntBASIC3.68□□□□□ -1.82
LIM2P55344 AL731566.2-201ENST00000618971 317 ntBASIC3.68□□□□□ -1.82
LIM2P55344 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.68□□□□□ -1.82
LIM2P55344 AC132825.7-201ENST00000638744 335 ntBASIC3.68□□□□□ -1.82
LIM2P55344 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.68□□□□□ -1.82
LIM2P55344 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms