Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH13P55290 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH13P55290 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH13P55290 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.22□□□□□ -1.73
CDH13P55290 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CDH13P55290 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH13P55290 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.73
CDH13P55290 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.21□□□□□ -1.73
CDH13P55290 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
CDH13P55290 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 RAD17P1-201ENST00000418130 2042 ntBASIC4.21□□□□□ -1.74
CDH13P55290 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH13P55290 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 SNORA58B-201ENST00000364259 136 ntBASIC4.21□□□□□ -1.74
CDH13P55290 RNU6-707P-201ENST00000364647 95 ntBASIC4.21□□□□□ -1.74
CDH13P55290 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CDH13P55290 AL139098.1-201ENST00000407291 389 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 TMSB10P2-201ENST00000416049 131 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 RPEP3-201ENST00000425462 676 ntBASIC4.21□□□□□ -1.74
CDH13P55290 MTCO1P3-201ENST00000429327 192 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 YWHAZP8-201ENST00000436935 731 ntBASIC4.21□□□□□ -1.74
CDH13P55290 OR10R1P-201ENST00000441524 1141 ntBASIC4.21□□□□□ -1.74
CDH13P55290 ARL2BPP10-201ENST00000446487 531 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC112492.1-201ENST00000449607 712 ntBASIC4.21□□□□□ -1.74
CDH13P55290 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH13P55290 VPS26AP1-201ENST00000483197 979 ntBASIC4.21□□□□□ -1.74
CDH13P55290 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH13P55290 AC108145.1-201ENST00000503770 153 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 MTND2P32-201ENST00000521584 1038 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.21□□□□□ -1.74
CDH13P55290 AP001317.1-201ENST00000531194 960 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.21□□□□□ -1.74
CDH13P55290 AGGF1P6-201ENST00000569213 976 ntBASIC4.21□□□□□ -1.74
CDH13P55290 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 AC115621.1-201ENST00000604653 858 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AL354984.3-201ENST00000604803 325 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AC007390.2-201ENST00000606229 3803 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AL157392.4-201ENST00000609756 345 ntBASIC4.21□□□□□ -1.74
CDH13P55290 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 AL021997.2-201ENST00000615674 271 ntBASIC4.21□□□□□ -1.74
CDH13P55290 AP005019.3-201ENST00000620418 560 ntBASIC4.21□□□□□ -1.74
CDH13P55290 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 FAM157B-203ENST00000639350 358 ntBASIC4.21□□□□□ -1.74
CDH13P55290 MTND5P31-201ENST00000419366 1374 ntBASIC4.21□□□□□ -1.74
CDH13P55290 EIF2AP4-201ENST00000424793 1781 ntBASIC4.21□□□□□ -1.74
CDH13P55290 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CDH13P55290 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
CDH13P55290 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CDH13P55290 AC025125.1-201ENST00000624743 1922 ntBASIC4.21□□□□□ -1.74
CDH13P55290 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
CDH13P55290 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 AL356489.2-201ENST00000566968 3528 ntBASIC4.2□□□□□ -1.74
CDH13P55290 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
CDH13P55290 MIR331-201ENST00000362302 94 ntBASIC4.2□□□□□ -1.74
CDH13P55290 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 MIR217-201ENST00000384817 110 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL583835.1-201ENST00000399570 407 ntBASIC4.2□□□□□ -1.74
CDH13P55290 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
CDH13P55290 AL121978.1-201ENST00000402778 359 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL450992.3-201ENST00000413192 568 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL161631.1-201ENST00000417933 486 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AC009237.2-201ENST00000421358 284 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.2□□□□□ -1.74
CDH13P55290 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.2□□□□□ -1.74
CDH13P55290 RAC1P8-201ENST00000427086 527 ntBASIC4.2□□□□□ -1.74
CDH13P55290 Z93242.1-201ENST00000427102 353 ntBASIC4.2□□□□□ -1.74
CDH13P55290 AC008065.1-201ENST00000428525 348 ntBASIC4.2□□□□□ -1.74
CDH13P55290 USP9YP9-201ENST00000429406 715 ntBASIC4.2□□□□□ -1.74
CDH13P55290 MTCO1P54-201ENST00000430139 712 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms