Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC234779.1-201ENST00000425910 285 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA1P49639 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA1P49639 MTCYBP34-201ENST00000439552 670 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA1P49639 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA1P49639 MTND2P4-201ENST00000445034 1004 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 TCEA1P1-201ENST00000449716 880 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 RPL23AP15-201ENST00000450202 459 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 TPMTP4-201ENST00000450749 678 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 IGHV5-78-201ENST00000450948 295 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 SETP20-201ENST00000457046 852 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 RPS17P2-201ENST00000461663 408 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA1P49639 NCOR1P1-202ENST00000486162 291 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 LINC00888-204ENST00000487386 421 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC108693.1-201ENST00000496068 432 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 AC111000.2-201ENST00000507775 550 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC117532.1-201ENST00000514638 323 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 IGLV3-26-201ENST00000520756 302 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXA1P49639 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXA1P49639 NMNAT1P1-201ENST00000554095 876 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 AC138915.2-201ENST00000569776 97 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.95□□□□□ -1.78
HOXA1P49639 AC244505.7-201ENST00000599675 272 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC103881.1-201ENST00000603476 538 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC124312.4-201ENST00000605533 310 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC079395.2-201ENST00000610982 737 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC007204.2-201ENST00000615022 616 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXA1P49639 AC073348.1-201ENST00000623002 331 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AP002505.2-201ENST00000623585 696 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC079248.2-201ENST00000623779 326 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AP003072.4-201ENST00000624580 310 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA1P49639 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA1P49639 FAM35DP-201ENST00000323387 2712 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA1P49639 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXA1P49639 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXA1P49639 AL049555.1-201ENST00000562834 1933 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.95□□□□□ -1.78
HOXA1P49639 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 LINC02471-203ENST00000641941 4752 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA1P49639 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
HOXA1P49639 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
HOXA1P49639 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 AC008549.2-201ENST00000333482 706 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 U3.2-201ENST00000362981 210 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RNU1-43P-201ENST00000365052 165 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA1P49639 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 AL139098.1-201ENST00000407291 389 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 SNORA11.3-201ENST00000408471 128 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RN7SKP206-201ENST00000410823 293 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 PRELID3BP11-201ENST00000414230 479 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AL513325.1-201ENST00000417716 1034 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 BX119904.4-201ENST00000424402 301 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RPS26P40-201ENST00000435209 294 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 YWHAZP7-201ENST00000436906 631 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 ELOCP10-201ENST00000440624 327 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AC118469.1-201ENST00000442943 488 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA1P49639 AC016724.1-201ENST00000453215 421 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RPL37P3-201ENST00000456825 293 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 NF1P3-201ENST00000457709 450 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RPL5P24-201ENST00000463742 885 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 MTND1P16-201ENST00000465177 898 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 BZW1P2-201ENST00000473537 826 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AC068305.1-201ENST00000497406 726 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AC008885.2-201ENST00000509506 930 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 RNY4P37-201ENST00000516225 96 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 RNA5SP135-201ENST00000517019 125 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA1P49639 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 HIGD1AP6-201ENST00000521833 279 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA1P49639 TOMM20P2-201ENST00000540082 421 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA1P49639 AC135279.1-201ENST00000543493 504 ntBASIC3.94□□□□□ -1.78
HOXA1P49639 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA1P49639 OR11J2P-201ENST00000555298 907 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms