Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 RPL7P48-201ENST00000461513 746 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 RPL23AP12-201ENST00000467573 473 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 RPL7P24-201ENST00000493052 752 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 AC092451.2-201ENST00000538746 658 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 GTF2IP22-201ENST00000554443 182 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.12□□□□□ -1.75
BRCC3P46736 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.12□□□□□ -1.75
BRCC3P46736 AC018552.3-201ENST00000567416 561 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.12□□□□□ -1.75
BRCC3P46736 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 BNIP3P19-201ENST00000605397 577 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.12□□□□□ -1.75
BRCC3P46736 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 AC139769.3-201ENST00000618383 175 ntBASIC4.12□□□□□ -1.75
BRCC3P46736 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRCC3P46736 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
BRCC3P46736 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.12□□□□□ -1.75
BRCC3P46736 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
BRCC3P46736 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
BRCC3P46736 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCC3P46736 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
BRCC3P46736 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
BRCC3P46736 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 SNORD74.4-201ENST00000364129 80 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 MIR513A2-201ENST00000385249 127 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 RNA5SP39-201ENST00000411245 120 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AC069157.1-201ENST00000421749 137 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 RPS24P8-201ENST00000431490 402 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 AL512661.1-201ENST00000434586 1253 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 AL358232.1-201ENST00000448030 501 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 RPL31P61-201ENST00000496160 376 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 HMGN1P15-201ENST00000513870 295 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 RNU1-95P-201ENST00000516357 160 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 RNU1-128P-201ENST00000516704 160 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 SNORA76.2-201ENST00000517095 137 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.11□□□□□ -1.75
BRCC3P46736 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCC3P46736 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.11□□□□□ -1.75
BRCC3P46736 MIR548Y-201ENST00000582739 110 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCC3P46736 AC244505.7-201ENST00000599675 272 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 PSMA6P4-201ENST00000603247 718 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AC012603.1-201ENST00000606424 528 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AC084824.5-201ENST00000612009 413 ntBASIC4.11□□□□□ -1.75
BRCC3P46736 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.11□□□□□ -1.75
BRCC3P46736 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.11□□□□□ -1.75
BRCC3P46736 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
BRCC3P46736 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 AL118496.1-201ENST00000440201 1812 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BRCC3P46736 MIR199A2-201ENST00000385289 110 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
BRCC3P46736 ZNF602P-201ENST00000405929 924 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.1□□□□□ -1.75
BRCC3P46736 AC010385.1-201ENST00000412374 256 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AC092647.1-201ENST00000420654 287 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 MTCO2P1-201ENST00000424648 477 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AL451062.2-201ENST00000427515 271 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 NANOGP6-201ENST00000429190 847 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.1□□□□□ -1.75
BRCC3P46736 RPS17P13-201ENST00000448974 407 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 AL451050.1-201ENST00000450126 415 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.1□□□□□ -1.75
BRCC3P46736 AL133162.1-201ENST00000463228 453 ntBASIC4.1□□□□□ -1.75
BRCC3P46736 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.1□□□□□ -1.75
BRCC3P46736 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
BRCC3P46736 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms