Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD10P28358 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXD10P28358 ANP32BP2-201ENST00000454525 545 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 RPL5P24-201ENST00000463742 885 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXD10P28358 AC017015.1-201ENST00000477387 286 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.44□□□□□ -1.7
HOXD10P28358 SCARNA14-201ENST00000516903 136 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.44□□□□□ -1.7
HOXD10P28358 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD10P28358 OR4A12P-201ENST00000530847 918 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD10P28358 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC4.44□□□□□ -1.7
HOXD10P28358 AC006960.3-201ENST00000561845 705 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.44□□□□□ -1.7
HOXD10P28358 AC009101.1-201ENST00000568135 242 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC027281.1-201ENST00000574178 758 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC012531.5-201ENST00000611375 151 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC139769.3-201ENST00000618383 175 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC243312.2-201ENST00000623340 601 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 MIR3651-201ENST00000630427 90 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 AC055839.1-201ENST00000634467 498 ntBASIC4.44□□□□□ -1.7
HOXD10P28358 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
HOXD10P28358 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
HOXD10P28358 NOL8P1-201ENST00000508336 3529 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 AL049781.1-201ENST00000623195 3585 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
HOXD10P28358 SPATA2P1-201ENST00000431223 2055 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXD10P28358 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD10P28358 AC004552.1-201ENST00000419089 348 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 TCEA1P2-201ENST00000420496 906 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD10P28358 AL392003.1-201ENST00000434394 243 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD10P28358 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD10P28358 PPIAP17-201ENST00000438507 471 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 EXTL2P1-201ENST00000446218 416 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 RPL21P23-201ENST00000446654 460 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 RPS3AP46-201ENST00000448352 682 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC005229.2-201ENST00000456995 399 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD10P28358 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD10P28358 SNORD108-201ENST00000459332 71 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 RPS26P3-201ENST00000470205 348 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 RN7SL601P-201ENST00000471221 293 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC090543.2-201ENST00000483963 348 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC004057.1-201ENST00000485827 348 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 ATG10-AS1-201ENST00000504846 648 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.43□□□□□ -1.7
HOXD10P28358 RN7SKP57-201ENST00000517248 293 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 AC009268.1-201ENST00000561352 1203 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD10P28358 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.43□□□□□ -1.7
HOXD10P28358 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.43□□□□□ -1.7
HOXD10P28358 AC012213.4-201ENST00000606457 354 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC074276.2-201ENST00000619891 348 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 AC140113.4-201ENST00000622087 222 ntBASIC4.43□□□□□ -1.7
HOXD10P28358 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
HOXD10P28358 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HOXD10P28358 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD10P28358 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 RNA5SP50-201ENST00000363731 107 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD10P28358 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXD10P28358 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HOXD10P28358 AC096664.2-201ENST00000411843 406 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 PGBD4P8-201ENST00000412993 562 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD10P28358 AC073335.1-201ENST00000427776 363 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 BX119904.1-201ENST00000432026 348 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD10P28358 BX510359.1-201ENST00000456973 237 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 SNORD105B-201ENST00000458770 79 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD10P28358 AC005726.1-201ENST00000494679 427 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD10P28358 RPL21P7-201ENST00000557463 483 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 AGGF1P8-201ENST00000562979 1000 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXD10P28358 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXD10P28358 AC008638.3-201ENST00000603341 463 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.42□□□□□ -1.7
HOXD10P28358 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HOXD10P28358 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.42□□□□□ -1.7
HOXD10P28358 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXD10P28358 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 139.5 ms