Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.72□□□□□ -1.65
MMP3P08254 TRBV8-2-201ENST00000475637 270 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC091959.2-201ENST00000477363 321 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC069528.1-202ENST00000482888 637 ntBASIC4.72□□□□□ -1.65
MMP3P08254 VN1R105P-201ENST00000486595 910 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AF213884.1-201ENST00000488102 463 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.72□□□□□ -1.65
MMP3P08254 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.72□□□□□ -1.65
MMP3P08254 AC006064.5-201ENST00000541782 248 ntBASIC4.72□□□□□ -1.65
MMP3P08254 ZNF321P-202ENST00000550843 495 ntBASIC4.72□□□□□ -1.65
MMP3P08254 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.72□□□□□ -1.65
MMP3P08254 AC122134.1-201ENST00000565664 1104 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.72□□□□□ -1.65
MMP3P08254 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.72□□□□□ -1.65
MMP3P08254 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC4.72□□□□□ -1.65
MMP3P08254 AC005412.1-201ENST00000580812 1049 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 RN7SL435P-201ENST00000584418 282 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 DUXAP3-201ENST00000603616 594 ntBASIC4.72□□□□□ -1.65
MMP3P08254 BNIP3P4-201ENST00000604946 565 ntBASIC4.72□□□□□ -1.65
MMP3P08254 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.72□□□□□ -1.65
MMP3P08254 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC4.72□□□□□ -1.65
MMP3P08254 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 AC009039.2-201ENST00000624524 529 ntBASIC4.72□□□□□ -1.65
MMP3P08254 AC017037.3-201ENST00000625016 472 ntBASIC4.72□□□□□ -1.65
MMP3P08254 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 CDRT1-208ENST00000630868 794 ntBASIC4.72□□□□□ -1.65
MMP3P08254 OR8B1P-202ENST00000641132 1178 ntBASIC4.72□□□□□ -1.65
MMP3P08254 LINC02211-204ENST00000642024 1070 ntBASIC4.72□□□□□ -1.65
MMP3P08254 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.72□□□□□ -1.65
MMP3P08254 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
MMP3P08254 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
MMP3P08254 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
MMP3P08254 CASC19-204ENST00000641001 2055 ntBASIC4.71□□□□□ -1.65
MMP3P08254 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.71□□□□□ -1.65
MMP3P08254 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
MMP3P08254 OR11H4-201ENST00000315409 1082 ntBASIC4.71□□□□□ -1.66
MMP3P08254 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 MIR554-201ENST00000384874 96 ntBASIC4.71□□□□□ -1.66
MMP3P08254 ATP5F1P3-201ENST00000397213 657 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 OR4K6P-201ENST00000416478 897 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 AC027644.1-201ENST00000419595 298 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.71□□□□□ -1.66
MMP3P08254 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 RPL5P23-201ENST00000496040 868 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 FTH1P21-201ENST00000512179 511 ntBASIC4.71□□□□□ -1.66
MMP3P08254 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 MTCO2P15-201ENST00000532655 656 ntBASIC4.71□□□□□ -1.66
MMP3P08254 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.71□□□□□ -1.66
MMP3P08254 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 NIFKP8-201ENST00000560500 874 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 AC053481.4-201ENST00000583164 216 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC004223.2-201ENST00000590309 544 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AP001542.2-201ENST00000593141 364 ntBASIC4.71□□□□□ -1.66
MMP3P08254 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.71□□□□□ -1.66
MMP3P08254 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.71□□□□□ -1.66
MMP3P08254 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC4.71□□□□□ -1.66
MMP3P08254 AC097478.2-201ENST00000610572 514 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC006133.1-201ENST00000617106 264 ntBASIC4.71□□□□□ -1.66
MMP3P08254 AC004777.1-201ENST00000624317 287 ntBASIC4.71□□□□□ -1.66
MMP3P08254 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.71□□□□□ -1.66
MMP3P08254 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
MMP3P08254 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.71□□□□□ -1.66
MMP3P08254 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
MMP3P08254 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
MMP3P08254 AC138393.1-206ENST00000540997 1886 ntBASIC4.71□□□□□ -1.66
MMP3P08254 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.7□□□□□ -1.66
MMP3P08254 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
MMP3P08254 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
MMP3P08254 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms