Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BTG4P1-201ENST00000510421 183 ntBASIC2.06□□□□□ -2.08
APOBP04114 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC2.06□□□□□ -2.08
APOBP04114 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.06□□□□□ -2.08
APOBP04114 AC021755.1-201ENST00000559747 1447 ntBASIC2.06□□□□□ -2.08
APOBP04114 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 AL353692.2-201ENST00000407054 335 ntBASIC2.06□□□□□ -2.08
APOBP04114 JKAMPP1-201ENST00000413804 919 ntBASIC2.06□□□□□ -2.08
APOBP04114 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 HLA-N-201ENST00000437516 135 ntBASIC2.06□□□□□ -2.08
APOBP04114 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 AC128713.1-201ENST00000471495 306 ntBASIC2.06□□□□□ -2.08
APOBP04114 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC2.06□□□□□ -2.08
APOBP04114 FCF1P3-201ENST00000496394 590 ntBASIC2.06□□□□□ -2.08
APOBP04114 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 OR4R3P-201ENST00000525084 838 ntBASIC2.06□□□□□ -2.08
APOBP04114 AC093524.1-201ENST00000564266 1094 ntBASIC2.06□□□□□ -2.08
APOBP04114 AC018692.3-201ENST00000623929 123 ntBASIC2.06□□□□□ -2.08
APOBP04114 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 AC007496.3-201ENST00000624987 3443 ntBASIC2.06□□□□□ -2.08
APOBP04114 IPO8P1-201ENST00000455509 3109 ntBASIC2.06□□□□□ -2.08
APOBP04114 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 AC007899.1-201ENST00000412776 775 ntBASIC2.06□□□□□ -2.08
APOBP04114 MYL8P-204ENST00000431574 518 ntBASIC2.06□□□□□ -2.08
APOBP04114 TPTE2P3-201ENST00000441562 1189 ntBASIC2.06□□□□□ -2.08
APOBP04114 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.06□□□□□ -2.08
APOBP04114 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.06□□□□□ -2.08
APOBP04114 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.06□□□□□ -2.08
APOBP04114 VN1R78P-201ENST00000597393 564 ntBASIC2.06□□□□□ -2.08
APOBP04114 MIR7843-201ENST00000622274 79 ntBASIC2.06□□□□□ -2.08
APOBP04114 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
APOBP04114 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.06□□□□□ -2.08
APOBP04114 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC2.06□□□□□ -2.08
APOBP04114 RIOK3P1-201ENST00000418778 1528 ntBASIC2.06□□□□□ -2.08
APOBP04114 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 SNORA7.4-201ENST00000384249 137 ntBASIC2.05□□□□□ -2.08
APOBP04114 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 NUP35P1-201ENST00000422734 947 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC003685.2-201ENST00000422795 395 ntBASIC2.05□□□□□ -2.08
APOBP04114 MTND2P11-201ENST00000423638 648 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.05□□□□□ -2.08
APOBP04114 ETF1P3-201ENST00000430422 1160 ntBASIC2.05□□□□□ -2.08
APOBP04114 AL035458.1-201ENST00000433096 585 ntBASIC2.05□□□□□ -2.08
APOBP04114 RPS20P1-201ENST00000434853 354 ntBASIC2.05□□□□□ -2.08
APOBP04114 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 AK5-208ENST00000478255 556 ntTSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 AC026782.2-201ENST00000510845 636 ntBASIC2.05□□□□□ -2.08
APOBP04114 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 AC231759.1-201ENST00000616455 597 ntBASIC2.05□□□□□ -2.08
APOBP04114 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
APOBP04114 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 RNU1-18P-201ENST00000363062 164 ntBASIC2.05□□□□□ -2.08
APOBP04114 RNA5SP146-201ENST00000410743 123 ntBASIC2.05□□□□□ -2.08
APOBP04114 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 SCARNA20.6-201ENST00000517251 106 ntBASIC2.05□□□□□ -2.08
APOBP04114 NDUFB9P3-201ENST00000521269 501 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC004024.1-201ENST00000549244 247 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 AC090312.2-201ENST00000582687 378 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC2.05□□□□□ -2.08
APOBP04114 BRDTP1-201ENST00000605735 677 ntBASIC2.05□□□□□ -2.08
APOBP04114 AL591424.2-201ENST00000617023 128 ntBASIC2.05□□□□□ -2.08
APOBP04114 ZNF826P-207ENST00000622273 1910 ntBASIC2.05□□□□□ -2.08
APOBP04114 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 CR383658.2-201ENST00000547576 1525 ntBASIC2.05□□□□□ -2.08
APOBP04114 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 CBX1P4-201ENST00000439415 457 ntBASIC2.05□□□□□ -2.08
APOBP04114 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 RPS17P11-201ENST00000474297 293 ntBASIC2.05□□□□□ -2.08
APOBP04114 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 NPM1P29-201ENST00000483112 803 ntBASIC2.05□□□□□ -2.08
APOBP04114 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 AC008413.1-201ENST00000511864 177 ntBASIC2.05□□□□□ -2.08
APOBP04114 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.05□□□□□ -2.08
APOBP04114 AC067852.4-201ENST00000590314 478 ntBASIC2.05□□□□□ -2.08
APOBP04114 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
APOBP04114 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.05□□□□□ -2.08
APOBP04114 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
APOBP04114 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms