Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AL049610.1-201ENST00000423374 372 ntBASIC3.84□□□□□ -1.79
APOEP02649 AC245517.2-201ENST00000442890 346 ntBASIC3.84□□□□□ -1.79
APOEP02649 Z95327.1-201ENST00000446082 482 ntBASIC3.84□□□□□ -1.79
APOEP02649 AC099563.1-201ENST00000456086 418 ntBASIC3.84□□□□□ -1.79
APOEP02649 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.84□□□□□ -1.79
APOEP02649 LARP7P4-201ENST00000481075 878 ntBASIC3.84□□□□□ -1.79
APOEP02649 AC011037.1-201ENST00000483964 558 ntBASIC3.84□□□□□ -1.79
APOEP02649 AL133372.1-201ENST00000493565 745 ntBASIC3.84□□□□□ -1.79
APOEP02649 HMGB1P23-201ENST00000518743 568 ntBASIC3.84□□□□□ -1.79
APOEP02649 AC007991.1-201ENST00000522680 631 ntBASIC3.84□□□□□ -1.79
APOEP02649 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.84□□□□□ -1.79
APOEP02649 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.84□□□□□ -1.79
APOEP02649 PSMA6P4-201ENST00000603247 718 ntBASIC3.84□□□□□ -1.79
APOEP02649 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.84□□□□□ -1.79
APOEP02649 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
APOEP02649 AL021368.2-201ENST00000606125 5352 ntBASIC3.84□□□□□ -1.8
APOEP02649 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.84□□□□□ -1.8
APOEP02649 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 RNA5SP124-201ENST00000362739 110 ntBASIC3.83□□□□□ -1.8
APOEP02649 AL359837.1-201ENST00000381357 287 ntBASIC3.83□□□□□ -1.8
APOEP02649 SNORD3H-201ENST00000384486 214 ntBASIC3.83□□□□□ -1.8
APOEP02649 MIR92A2-201ENST00000385299 75 ntBASIC3.83□□□□□ -1.8
APOEP02649 SOD2P1-201ENST00000396543 562 ntBASIC3.83□□□□□ -1.8
APOEP02649 PTMAP2-201ENST00000397627 327 ntBASIC3.83□□□□□ -1.8
APOEP02649 MTCO3P31-201ENST00000405526 789 ntBASIC3.83□□□□□ -1.8
APOEP02649 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.83□□□□□ -1.8
APOEP02649 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.83□□□□□ -1.8
APOEP02649 HMGB3P20-201ENST00000417997 600 ntBASIC3.83□□□□□ -1.8
APOEP02649 AL035423.1-201ENST00000420331 213 ntBASIC3.83□□□□□ -1.8
APOEP02649 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.83□□□□□ -1.8
APOEP02649 AC239367.2-201ENST00000447309 705 ntBASIC3.83□□□□□ -1.8
APOEP02649 RPS3AP46-201ENST00000448352 682 ntBASIC3.83□□□□□ -1.8
APOEP02649 AC010655.1-201ENST00000449336 292 ntBASIC3.83□□□□□ -1.8
APOEP02649 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 SNORA84-201ENST00000459229 133 ntBASIC3.83□□□□□ -1.8
APOEP02649 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.83□□□□□ -1.8
APOEP02649 RPL23AP14-201ENST00000468281 468 ntBASIC3.83□□□□□ -1.8
APOEP02649 AP001960.1-201ENST00000506494 658 ntBASIC3.83□□□□□ -1.8
APOEP02649 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.83□□□□□ -1.8
APOEP02649 TRMT10BP1-201ENST00000519377 943 ntBASIC3.83□□□□□ -1.8
APOEP02649 SMARCE1P4-201ENST00000523647 241 ntBASIC3.83□□□□□ -1.8
APOEP02649 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.83□□□□□ -1.8
APOEP02649 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.83□□□□□ -1.8
APOEP02649 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.83□□□□□ -1.8
APOEP02649 RNU1-30P-201ENST00000606575 163 ntBASIC3.83□□□□□ -1.8
APOEP02649 AC092628.2-201ENST00000622492 339 ntBASIC3.83□□□□□ -1.8
APOEP02649 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 CFTRP2-201ENST00000634304 199 ntBASIC3.83□□□□□ -1.8
APOEP02649 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 AC090229.1-201ENST00000590983 1609 ntBASIC3.83□□□□□ -1.8
APOEP02649 ZNF285B-201ENST00000561698 1767 ntBASIC3.83□□□□□ -1.8
APOEP02649 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
APOEP02649 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
APOEP02649 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.82□□□□□ -1.8
APOEP02649 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOEP02649 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
APOEP02649 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.82□□□□□ -1.8
APOEP02649 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
APOEP02649 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
APOEP02649 RNU6-304P-201ENST00000364855 107 ntBASIC3.82□□□□□ -1.8
APOEP02649 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
APOEP02649 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.82□□□□□ -1.8
APOEP02649 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.82□□□□□ -1.8
APOEP02649 AC093716.1-201ENST00000435923 377 ntBASIC3.82□□□□□ -1.8
APOEP02649 RNU6-1218P-201ENST00000458990 108 ntBASIC3.82□□□□□ -1.8
APOEP02649 AC022034.3-201ENST00000471393 478 ntBASIC3.82□□□□□ -1.8
APOEP02649 AP000893.1-201ENST00000474462 794 ntBASIC3.82□□□□□ -1.8
APOEP02649 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.82□□□□□ -1.8
APOEP02649 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 AC010627.1-201ENST00000503819 1294 ntBASIC3.82□□□□□ -1.8
APOEP02649 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.82□□□□□ -1.8
APOEP02649 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
APOEP02649 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.82□□□□□ -1.8
APOEP02649 RNU1-95P-201ENST00000516357 160 ntBASIC3.82□□□□□ -1.8
APOEP02649 RNU1-128P-201ENST00000516704 160 ntBASIC3.82□□□□□ -1.8
APOEP02649 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
APOEP02649 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.82□□□□□ -1.8
APOEP02649 AL121576.1-201ENST00000556055 276 ntBASIC3.82□□□□□ -1.8
APOEP02649 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.82□□□□□ -1.8
APOEP02649 MIR1254-2-201ENST00000579553 63 ntBASIC3.82□□□□□ -1.8
APOEP02649 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC3.82□□□□□ -1.8
APOEP02649 AC245389.1-201ENST00000605141 529 ntBASIC3.82□□□□□ -1.8
APOEP02649 AC019131.2-201ENST00000609071 870 ntBASIC3.82□□□□□ -1.8
APOEP02649 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.82□□□□□ -1.8
APOEP02649 AC039056.2-201ENST00000622261 511 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms