Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 AC093578.1-201ENST00000415219 368 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC073069.1-201ENST00000428657 441 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 FTH1P6-201ENST00000430768 320 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AL356276.2-201ENST00000435919 558 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 CYCSP42-201ENST00000450823 238 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 HMGB1P26-201ENST00000452520 628 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 RNU7-27P-201ENST00000459281 62 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC025459.1-201ENST00000504072 156 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 NDUFB4P9-201ENST00000511646 388 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC138701.1-201ENST00000524329 714 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AP000926.4-201ENST00000527351 454 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 NOP56P3-201ENST00000549457 385 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 MIR4277-201ENST00000578298 84 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 VN1R84P-201ENST00000593697 235 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 BNIP3P38-201ENST00000601117 544 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC010680.3-201ENST00000604215 520 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC104307.1-201ENST00000616142 196 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC003001.2-201ENST00000616294 831 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC025016.1-201ENST00000616746 682 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AL162233.1-201ENST00000620014 944 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 AC110801.1-201ENST00000623590 212 ntBASIC3.19□□□□□ -1.9
HLA-DQB1P01920 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.19□□□□□ -1.9
HLA-DQB1P01920 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 MTND4P11-201ENST00000417020 1058 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 TCEA1P2-201ENST00000420496 906 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC009480.2-201ENST00000422916 432 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC245028.1-201ENST00000423259 256 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL160175.1-201ENST00000428124 247 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 MTND4LP14-201ENST00000429447 288 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 RPL12P26-201ENST00000452430 487 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 RPS29P33-201ENST00000456717 146 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 RPS3AP6-201ENST00000484430 795 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AP000919.1-202ENST00000581139 1264 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 MIR3138-201ENST00000585238 82 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC006254.3-201ENST00000603353 884 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 ABI1P1-201ENST00000603375 1120 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL049634.3-201ENST00000604968 457 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AL139811.1-201ENST00000424779 2299 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 CASC19-261ENST00000641853 1638 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 AC053481.2-202ENST00000582394 1500 ntBASIC3.18□□□□□ -1.9
HLA-DQB1P01920 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HLA-DQB1P01920 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB1P01920 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.17□□□□□ -1.9
HLA-DQB1P01920 XIAPP3-201ENST00000312918 795 ntBASIC3.17□□□□□ -1.9
HLA-DQB1P01920 SNORD51.1-201ENST00000365405 77 ntBASIC3.17□□□□□ -1.9
HLA-DQB1P01920 RNU6-883P-201ENST00000384597 107 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms