Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 AC068533.1-201ENST00000418542 415 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AL590623.1-201ENST00000427864 105 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 COX6B1P7-201ENST00000430845 235 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AL162151.2-201ENST00000448875 158 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1BO75841 RPL21P11-201ENST00000461458 483 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK1BO75841 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 COX6B1P6-201ENST00000522347 255 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
UPK1BO75841 YPEL5P3-201ENST00000547227 352 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 TVP23BP1-201ENST00000557500 617 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.19□□□□□ -1.9
UPK1BO75841 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1BO75841 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC3.19□□□□□ -1.9
UPK1BO75841 AC026124.2-201ENST00000621847 656 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AC004808.2-201ENST00000627965 773 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
UPK1BO75841 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.19□□□□□ -1.9
UPK1BO75841 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
UPK1BO75841 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC131971.1-201ENST00000332881 1482 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 SNORA70E-201ENST00000384492 135 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 MIR765-201ENST00000390226 114 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RNA5SP424-201ENST00000390988 115 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RNU2-65P-201ENST00000410162 185 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RNU2-21P-201ENST00000410368 188 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 XKRYP4-201ENST00000414395 483 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 NDUFB4P5-201ENST00000415445 361 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RPL37P1-201ENST00000432310 284 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 RPL36AP15-201ENST00000444514 266 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK1BO75841 RSL24D1P2-201ENST00000445584 366 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 XKRYP5-201ENST00000449659 483 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RPS23P7-201ENST00000466210 444 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC078785.3-201ENST00000476607 425 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC005351.1-201ENST00000511152 786 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC008494.2-201ENST00000514544 370 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.18□□□□□ -1.9
UPK1BO75841 RN7SKP283-201ENST00000517197 270 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 IGLVIV-65-201ENST00000517313 360 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC245166.1-201ENST00000521012 253 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AP000926.4-201ENST00000527351 454 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 MTND2P26-201ENST00000528255 1029 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC139103.1-201ENST00000534696 1030 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AL121766.1-201ENST00000547436 487 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 TRAV15-201ENST00000556680 249 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.18□□□□□ -1.9
UPK1BO75841 AC091167.4-201ENST00000605079 184 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AL354760.1-201ENST00000608357 643 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC116651.1-201ENST00000609724 556 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC019193.2-201ENST00000610012 634 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AL121612.2-201ENST00000612261 482 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.18□□□□□ -1.9
UPK1BO75841 MIR6864-201ENST00000617935 70 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 AC104820.1-201ENST00000624183 307 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 SNORA50A-202ENST00000629536 136 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC138649.5-201ENST00000637456 137 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 OR56B2P-202ENST00000641377 2453 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
UPK1BO75841 AL137100.1-201ENST00000556703 1620 ntBASIC3.18□□□□□ -1.9
UPK1BO75841 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
UPK1BO75841 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms