Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RNU6-1129P-201ENST00000515964 104 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 ZNF705CP-201ENST00000530515 889 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF3O43395 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 REXO2-218ENST00000544827 880 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 MIR6780A-201ENST00000615089 68 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 FAM157B-203ENST00000639350 358 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.36□□□□□ -1.55
PRPF3O43395 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.36□□□□□ -1.55
PRPF3O43395 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 LINC01109-201ENST00000603837 3081 ntBASIC5.36□□□□□ -1.55
PRPF3O43395 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PRPF3O43395 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PRPF3O43395 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC104118.1-201ENST00000607625 1589 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC103591.2-201ENST00000265259 766 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 OR4A15-201ENST00000314706 1035 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 IL6STP1-201ENST00000346911 1020 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 RNU6-921P-201ENST00000384361 107 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 RNU6-1122P-201ENST00000384449 107 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PRPF3O43395 AL049697.2-201ENST00000403708 294 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF3O43395 RAP1BP1-201ENST00000412709 553 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 COX6CP15-201ENST00000426313 211 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 NPM1P34-201ENST00000428821 893 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 AL354941.1-201ENST00000438600 464 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 CEACAMP9-201ENST00000442990 513 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AL513533.1-201ENST00000453728 415 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC104763.1-201ENST00000475274 360 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 RPL12P20-201ENST00000475538 479 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 AC005726.1-201ENST00000494679 427 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 RNF138P1-201ENST00000502765 546 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 RN7SKP46-201ENST00000515942 234 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 SLC2A13P1-201ENST00000531560 322 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC125611.1-201ENST00000549563 229 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 BNIP3P24-201ENST00000593398 557 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC069304.2-201ENST00000605154 435 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AL139344.1-201ENST00000605228 195 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC131235.4-201ENST00000609288 620 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AL360219.1-201ENST00000610230 366 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC100827.5-201ENST00000615883 426 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC098679.5-201ENST00000624394 571 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 AC120349.2-201ENST00000625002 298 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PRPF3O43395 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.35□□□□□ -1.55
PRPF3O43395 ZNF137P-201ENST00000456718 1920 ntBASIC5.35□□□□□ -1.55
PRPF3O43395 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
PRPF3O43395 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 AL391684.1-202ENST00000641293 1636 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
PRPF3O43395 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.34□□□□□ -1.55
PRPF3O43395 AC021146.4-201ENST00000309229 279 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 RNU6-1293P-201ENST00000384077 107 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
PRPF3O43395 Z98745.1-201ENST00000402553 494 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 RN7SKP106-201ENST00000410832 272 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 AC073264.1-201ENST00000411508 416 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 TPT1P2-201ENST00000413105 503 ntBASIC5.34□□□□□ -1.55
PRPF3O43395 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms