Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
MSH4O15457 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH4O15457 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 AC011155.1-201ENST00000316512 456 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AC007685.1-201ENST00000329806 452 ntBASIC4.11□□□□□ -1.75
MSH4O15457 SNORD9-201ENST00000362566 104 ntBASIC4.11□□□□□ -1.75
MSH4O15457 RNU1-85P-201ENST00000364127 164 ntBASIC4.11□□□□□ -1.75
MSH4O15457 RPL21P109-201ENST00000422213 475 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH4O15457 AC091286.1-201ENST00000431233 461 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 RPL37P1-201ENST00000432310 284 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AF228730.2-201ENST00000438784 848 ntBASIC4.11□□□□□ -1.75
MSH4O15457 HMGB1P5-202ENST00000451497 985 ntBASIC4.11□□□□□ -1.75
MSH4O15457 RPL7P15-201ENST00000461190 712 ntBASIC4.11□□□□□ -1.75
MSH4O15457 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH4O15457 AC106707.2-201ENST00000484182 374 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH4O15457 RANP9-201ENST00000519957 271 ntBASIC4.11□□□□□ -1.75
MSH4O15457 TRAV15-201ENST00000556680 249 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.11□□□□□ -1.75
MSH4O15457 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.11□□□□□ -1.75
MSH4O15457 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 SNORA51-201ENST00000606420 132 ntBASIC4.11□□□□□ -1.75
MSH4O15457 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MSH4O15457 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH4O15457 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH4O15457 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.11□□□□□ -1.75
MSH4O15457 OR8B1P-202ENST00000641132 1178 ntBASIC4.11□□□□□ -1.75
MSH4O15457 AC009093.8-201ENST00000641769 292 ntBASIC4.11□□□□□ -1.75
MSH4O15457 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH4O15457 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.11□□□□□ -1.75
MSH4O15457 ASNSP1-201ENST00000518311 1939 ntBASIC4.11□□□□□ -1.75
MSH4O15457 SAGE2P-201ENST00000420011 2126 ntBASIC4.1□□□□□ -1.75
MSH4O15457 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MSH4O15457 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
MSH4O15457 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 GCNT6-201ENST00000379591 934 ntBASIC4.1□□□□□ -1.75
MSH4O15457 RNU6-185P-201ENST00000384421 107 ntBASIC4.1□□□□□ -1.75
MSH4O15457 MIR200C-201ENST00000384980 68 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH4O15457 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AL160175.1-201ENST00000428124 247 ntBASIC4.1□□□□□ -1.75
MSH4O15457 IFNNP1-201ENST00000429219 553 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 MTND4LP7-201ENST00000431728 294 ntBASIC4.1□□□□□ -1.75
MSH4O15457 ARL4AP4-201ENST00000434170 518 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH4O15457 XKRY2-201ENST00000442362 1093 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC099563.1-201ENST00000456086 418 ntBASIC4.1□□□□□ -1.75
MSH4O15457 RPL23AP12-201ENST00000467573 473 ntBASIC4.1□□□□□ -1.75
MSH4O15457 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 SYT14P1-201ENST00000481459 721 ntBASIC4.1□□□□□ -1.75
MSH4O15457 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC005726.1-201ENST00000494679 427 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 RN7SKP18-201ENST00000516005 275 ntBASIC4.1□□□□□ -1.75
MSH4O15457 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.1□□□□□ -1.75
MSH4O15457 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 AL360157.1-201ENST00000565962 87 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.1□□□□□ -1.75
MSH4O15457 AL355802.4-201ENST00000607635 548 ntBASIC4.1□□□□□ -1.75
MSH4O15457 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 MIR486-1-201ENST00000612171 68 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AP004607.9-201ENST00000618202 316 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC103858.2-201ENST00000621471 543 ntBASIC4.1□□□□□ -1.75
MSH4O15457 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 AC093311.1-201ENST00000506586 2021 ntBASIC4.1□□□□□ -1.75
MSH4O15457 AC018529.3-201ENST00000624212 2254 ntBASIC4.1□□□□□ -1.75
MSH4O15457 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
MSH4O15457 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.1□□□□□ -1.75
MSH4O15457 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH4O15457 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
MSH4O15457 MIR708-201ENST00000390708 88 ntBASIC4.09□□□□□ -1.75
MSH4O15457 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
MSH4O15457 MTHFD2P2-201ENST00000407725 247 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC105402.1-201ENST00000413336 545 ntBASIC4.09□□□□□ -1.75
MSH4O15457 TRGV6-201ENST00000417928 299 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AL389915.1-201ENST00000422463 466 ntBASIC4.09□□□□□ -1.75
MSH4O15457 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH4O15457 MTCO1P52-201ENST00000433928 531 ntBASIC4.09□□□□□ -1.75
MSH4O15457 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.09□□□□□ -1.75
MSH4O15457 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.09□□□□□ -1.75
MSH4O15457 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.09□□□□□ -1.75
MSH4O15457 MTND5P8-201ENST00000449817 1083 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms