Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APAF1O14727 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
APAF1O14727 AC090971.4-201ENST00000560291 1800 ntBASIC5.53□□□□□ -1.52
APAF1O14727 AL133243.3-201ENST00000617415 3004 ntBASIC5.53□□□□□ -1.52
APAF1O14727 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
APAF1O14727 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
APAF1O14727 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
APAF1O14727 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 RNU6-575P-201ENST00000411326 105 ntBASIC5.52□□□□□ -1.53
APAF1O14727 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 RAC1P8-201ENST00000427086 527 ntBASIC5.52□□□□□ -1.53
APAF1O14727 HIGD1AP12-201ENST00000427832 281 ntBASIC5.52□□□□□ -1.53
APAF1O14727 HMGB3P5-201ENST00000428894 612 ntBASIC5.52□□□□□ -1.53
APAF1O14727 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.52□□□□□ -1.53
APAF1O14727 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 CR769776.1-201ENST00000441254 787 ntBASIC5.52□□□□□ -1.53
APAF1O14727 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 Z73417.1-201ENST00000447373 778 ntBASIC5.52□□□□□ -1.53
APAF1O14727 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 AC010683.1-201ENST00000473673 378 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 RN7SKP96-201ENST00000516948 297 ntBASIC5.52□□□□□ -1.53
APAF1O14727 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 AC022655.2-201ENST00000577280 318 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 RN7SL176P-201ENST00000580352 264 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 IPO5P1-202ENST00000600039 287 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC022022.2-201ENST00000602989 360 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC016877.3-201ENST00000606778 504 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AP005137.2-201ENST00000609238 400 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC008147.4-201ENST00000617570 1204 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC243756.2-201ENST00000618406 463 ntBASIC5.52□□□□□ -1.53
APAF1O14727 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.52□□□□□ -1.53
APAF1O14727 AC006963.1-201ENST00000624003 1052 ntBASIC5.52□□□□□ -1.53
APAF1O14727 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 MIR6830-201ENST00000636015 70 ntBASIC5.52□□□□□ -1.53
APAF1O14727 AC009452.1-201ENST00000640823 606 ntBASIC5.52□□□□□ -1.53
APAF1O14727 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
APAF1O14727 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.52□□□□□ -1.53
APAF1O14727 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.52□□□□□ -1.53
APAF1O14727 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
APAF1O14727 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.51□□□□□ -1.53
APAF1O14727 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
APAF1O14727 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
APAF1O14727 SNORA37-201ENST00000384504 129 ntBASIC5.51□□□□□ -1.53
APAF1O14727 RNU6-636P-201ENST00000384598 107 ntBASIC5.51□□□□□ -1.53
APAF1O14727 SNORA68.2-201ENST00000391263 128 ntBASIC5.51□□□□□ -1.53
APAF1O14727 VDAC2P1-201ENST00000399358 958 ntBASIC5.51□□□□□ -1.53
APAF1O14727 HNRNPDP2-201ENST00000406475 478 ntBASIC5.51□□□□□ -1.53
APAF1O14727 MIR1179-201ENST00000408703 91 ntBASIC5.51□□□□□ -1.53
APAF1O14727 OR4K6P-201ENST00000416478 897 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AL590609.2-201ENST00000421430 368 ntBASIC5.51□□□□□ -1.53
APAF1O14727 MTCO1P3-201ENST00000429327 192 ntBASIC5.51□□□□□ -1.53
APAF1O14727 NPM1P33-201ENST00000438918 872 ntBASIC5.51□□□□□ -1.53
APAF1O14727 RPL23AP89-201ENST00000439324 255 ntBASIC5.51□□□□□ -1.53
APAF1O14727 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 AL591623.2-201ENST00000449978 222 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.51□□□□□ -1.53
APAF1O14727 AC096992.1-201ENST00000459808 709 ntBASIC5.51□□□□□ -1.53
APAF1O14727 RPL21P71-201ENST00000465598 459 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 OR4C2P-201ENST00000530855 1064 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC5.51□□□□□ -1.53
APAF1O14727 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.51□□□□□ -1.53
APAF1O14727 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 CYP4A43P-201ENST00000568156 121 ntBASIC5.51□□□□□ -1.53
APAF1O14727 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.51□□□□□ -1.53
APAF1O14727 AC105227.2-201ENST00000615075 605 ntBASIC5.51□□□□□ -1.53
APAF1O14727 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC5.51□□□□□ -1.53
APAF1O14727 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
APAF1O14727 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms