Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN3O00409 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN3O00409 OR51H2P-202ENST00000641424 3046 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXN3O00409 FABP12P1-201ENST00000401911 322 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC068533.2-201ENST00000411872 306 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN3O00409 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN3O00409 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN3O00409 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 AL591503.2-201ENST00000442314 1005 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 snoU13.7-201ENST00000459220 104 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.04□□□□□ -1.6
FOXN3O00409 HMGB3P13-201ENST00000511263 607 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 AC090502.2-201ENST00000549267 280 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC5.04□□□□□ -1.6
FOXN3O00409 AC015912.2-201ENST00000571053 181 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 MIR4646-201ENST00000580775 63 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC209154.1-201ENST00000582156 337 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 COX6CP4-201ENST00000605798 228 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC245008.1-201ENST00000608123 476 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC116651.1-201ENST00000609724 556 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AL359535.1-201ENST00000612100 1087 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AC103706.2-201ENST00000638080 240 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 OR8B1P-202ENST00000641132 1178 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN3O00409 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
FOXN3O00409 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.04□□□□□ -1.6
FOXN3O00409 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
FOXN3O00409 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
FOXN3O00409 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN3O00409 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
FOXN3O00409 AP000526.1-201ENST00000603308 1388 ntBASIC5.04□□□□□ -1.6
FOXN3O00409 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 ZFRP1-201ENST00000457579 2970 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.03□□□□□ -1.6
FOXN3O00409 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 RNU5A-2P-201ENST00000384337 116 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 MIR105-2-201ENST00000385083 81 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF603P-201ENST00000405613 487 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 RN7SKP125-201ENST00000410481 302 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC016769.2-201ENST00000414815 475 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC098592.1-201ENST00000419352 333 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 ZNF885P-201ENST00000420174 1098 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AL365396.1-201ENST00000430854 671 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 NRBF2P3-201ENST00000432731 865 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 UBE2D3P1-201ENST00000436669 444 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC241584.1-201ENST00000438469 1241 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC063943.1-201ENST00000465434 453 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC010301.1-201ENST00000473936 355 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXN3O00409 HMGB1P19-201ENST00000517578 577 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC027309.2-201ENST00000520566 192 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXN3O00409 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC044860.2-201ENST00000561005 179 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXN3O00409 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AL512347.1-201ENST00000566420 503 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.03□□□□□ -1.6
FOXN3O00409 AC005191.1-201ENST00000603950 358 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC106791.2-201ENST00000604680 391 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.03□□□□□ -1.6
FOXN3O00409 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 AL136164.3-201ENST00000624429 3978 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.03□□□□□ -1.6
FOXN3O00409 AP001273.1-201ENST00000624493 3152 ntBASIC5.03□□□□□ -1.6
FOXN3O00409 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
FOXN3O00409 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
FOXN3O00409 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms