Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL17P49-201ENST00000443728 411 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC010655.1-201ENST00000449336 292 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SL172P-201ENST00000460535 303 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC084198.1-201ENST00000477747 402 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 OR5H3P-201ENST00000502817 919 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC108941.1-201ENST00000502853 530 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 BTF3P13-201ENST00000513224 490 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 MTND1P6-201ENST00000523621 946 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 CASP1P2-201ENST00000526830 1258 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AP000827.1-201ENST00000527814 258 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 STX3-204ENST00000530221 534 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 NPM1P47-201ENST00000560843 856 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 BGLT3-201ENST00000564523 994 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC027281.1-201ENST00000574178 758 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AP005901.4-201ENST00000577336 569 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC005726.4-201ENST00000582858 458 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 SNORD84-203ENST00000584275 78 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC073091.2-201ENST00000603205 907 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC113194.1-201ENST00000606037 500 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AL355816.1-201ENST00000607951 118 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AL445363.3-201ENST00000623080 671 ntBASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
CHKB-CPT1BH3BT56 AL356317.1-201ENST00000396110 1436 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 DHX40P1-201ENST00000588725 1412 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AL137100.1-201ENST00000556703 1620 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 SDAD1P1-202ENST00000524156 2051 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 OR4K15-201ENST00000305051 1216 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 VTRNA1-1-201ENST00000363120 99 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RNU1-130P-201ENST00000363930 160 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 CD2-201ENST00000369477 478 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC068538.1-201ENST00000376856 336 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP178-201ENST00000410380 128 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP113-201ENST00000410486 84 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RN7SKP293-201ENST00000411389 296 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AP000534.2-201ENST00000412729 568 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC096644.3-201ENST00000416788 338 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC244098.2-201ENST00000422068 99 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LARP7P4-201ENST00000481075 878 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 UBA52P7-201ENST00000486088 380 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL37AP8-201ENST00000494116 276 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RPL21P131-201ENST00000497298 483 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP164-201ENST00000516533 110 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 RNA5SP179-201ENST00000517284 121 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 IGLVIV-65-201ENST00000517313 360 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 MED28P5-201ENST00000528254 438 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 OR6C73P-201ENST00000546432 358 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC091516.1-201ENST00000549191 703 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC023043.3-201ENST00000593113 385 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 IPO5P1-202ENST00000600039 287 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 SNRPGP15-201ENST00000600149 222 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AL592494.3-201ENST00000609485 464 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AC069234.5-201ENST00000611056 416 ntBASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 TEX41-279ENST00000629149 609 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC1.91□□□□□ -2.1
CHKB-CPT1BH3BT56 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms