Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AC073592.7-201ENST00000623659 507 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 AL136964.1-201ENST00000622038 2990 ntBASIC3.72□□□□□ -1.81
TMX2-CTNND1H3BSU7 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.81
TMX2-CTNND1H3BSU7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
TMX2-CTNND1H3BSU7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
TMX2-CTNND1H3BSU7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
TMX2-CTNND1H3BSU7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNU6-525P-201ENST00000363685 104 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 U8.11-201ENST00000384699 133 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 U8.12-201ENST00000384701 133 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 DPY19L1P2-201ENST00000426647 915 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC091286.1-201ENST00000431233 461 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL138787.1-202ENST00000437804 898 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 Z99127.2-201ENST00000441426 334 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS3AP12-201ENST00000443616 753 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 U8.18-201ENST00000459285 133 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC022336.1-201ENST00000475510 337 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC021146.1-201ENST00000511202 716 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 GNRHR2P1-201ENST00000555315 631 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL021368.1-201ENST00000607490 540 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC012467.1-201ENST00000607740 256 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL159169.2-201ENST00000610061 1269 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 OR10AB1P-202ENST00000641219 1686 ntBASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
TMX2-CTNND1H3BSU7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC087565.3-202ENST00000642085 1603 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC234772.1-201ENST00000377927 937 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 RPS29P4-201ENST00000414733 161 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC019070.1-201ENST00000415008 1024 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 TCEA1P2-201ENST00000420496 906 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 SEC63P1-201ENST00000425785 1258 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 ATP5HP2-201ENST00000433885 485 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC083863.1-201ENST00000438811 231 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 RAB28P3-201ENST00000448325 597 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC089999.1-201ENST00000460336 374 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 METTL15P1-201ENST00000481421 1045 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC106872.2-201ENST00000494303 480 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC026726.1-201ENST00000512859 601 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 IGKV2D-23-201ENST00000518179 286 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 CCNG2P1-201ENST00000549521 1000 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL121576.1-201ENST00000556055 276 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 RN7SL339P-201ENST00000580597 296 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 VN1R79P-201ENST00000593540 513 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 MRPS35P3-201ENST00000603189 709 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC007179.3-201ENST00000604976 235 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AL592494.3-201ENST00000609485 464 ntBASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
TMX2-CTNND1H3BSU7 SNORA62.2-201ENST00000364672 152 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 RNU6-1263P-201ENST00000384601 106 ntBASIC3.69□□□□□ -1.82
TMX2-CTNND1H3BSU7 MIR199A2-201ENST00000385289 110 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms