Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 RPS27AP3-201ENST00000453803 454 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC012123.2-201ENST00000485809 248 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC093677.1-201ENST00000514414 678 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AF235103.2-201ENST00000525753 346 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC068790.5-201ENST00000602741 355 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AL353621.2-201ENST00000605340 133 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC009318.4-201ENST00000620496 486 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 KPNA2P2-201ENST00000419546 1489 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AC017104.4-201ENST00000636283 1592 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 AL359195.2-201ENST00000623657 4412 ntBASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.64□□□□□ -1.35
TMEM88BA6NKF7 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC126755.2-208ENST00000327792 462 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC138969.1-213ENST00000331436 462 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 BTBD10P2-201ENST00000404779 676 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 HMGB3P20-201ENST00000417997 600 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 SNRPEP10-201ENST00000420249 274 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AL513185.2-201ENST00000425543 193 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AL136231.1-201ENST00000429407 730 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 USP24P1-201ENST00000433802 779 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC104850.1-201ENST00000435940 476 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 OR6D1P-201ENST00000436165 939 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC105399.1-202ENST00000447303 205 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 EEF1A1P24-201ENST00000451469 1378 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC104073.1-201ENST00000451988 151 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 IGLV2-34-201ENST00000490007 283 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 RPL23AP72-201ENST00000492447 435 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 INTS6P1-201ENST00000504674 2530 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AL122126.1-201ENST00000546905 1318 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC069307.1-201ENST00000602820 447 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC007621.1-201ENST00000604544 437 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC055876.5-201ENST00000605667 259 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AP001330.5-201ENST00000607176 411 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 MAML2-202ENST00000618849 3154 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 AC012254.5-201ENST00000623573 478 ntBASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
TMEM88BA6NKF7 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
TMEM88BA6NKF7 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms