Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 VN1R25P-201ENST00000443385 738 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 Z77249.1-201ENST00000444622 1175 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 VN1R40P-201ENST00000455196 941 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 snoU13.7-201ENST00000459220 104 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RPL23AP62-201ENST00000463396 453 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7P1-201ENST00000468161 747 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7P9-201ENST00000468715 747 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC078785.3-201ENST00000476607 425 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC069499.1-201ENST00000489433 509 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RPL29P14-201ENST00000495837 428 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RAB9BP1-201ENST00000519581 626 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 MIR4284-201ENST00000578924 81 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC245128.3-201ENST00000594721 748 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AP003392.5-201ENST00000607857 415 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 AP000255.1-201ENST00000610276 676 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 CR589904.2-201ENST00000612533 440 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 MIR8059-201ENST00000620427 81 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 RNU6-156P-201ENST00000621869 107 ntBASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RHBDD3Q9Y3P4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 VTA1P1-201ENST00000414044 866 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 OR51AB1P-201ENST00000429046 620 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 HMGB1P45-201ENST00000435986 653 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 TRBV8-2-201ENST00000475637 270 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7P24-201ENST00000493052 752 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 OR9N1P-202ENST00000494289 481 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 RPS27AP13-201ENST00000498403 237 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 RPL7L1P13-201ENST00000511702 739 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 C1GALT1P3-201ENST00000522049 819 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC025627.2-201ENST00000576220 160 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 MIR5684-201ENST00000585074 65 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 MIR486-1-201ENST00000612171 68 ntBASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC3.5□□□□□ -1.85
RHBDD3Q9Y3P4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 AC027287.1-201ENST00000553115 1453 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 SNORA51.2-201ENST00000364595 132 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 SNORA56-201ENST00000383966 129 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 ENSAP1-201ENST00000392855 326 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 PTMAP5-201ENST00000393073 333 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 OR6C69P-201ENST00000394268 893 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 MIR1303-201ENST00000408625 86 ntBASIC3.49□□□□□ -1.85
RHBDD3Q9Y3P4 AC244453.4-201ENST00000419150 388 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms