Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 REREP1Y-201ENST00000422655 198 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AL590762.4-201ENST00000425885 253 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 MTCO3P21-201ENST00000430791 643 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RPS3AP54-201ENST00000435535 734 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AL445928.1-201ENST00000435545 222 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 IFNA20P-201ENST00000436840 528 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC006335.2-201ENST00000437993 330 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 REREP2Y-201ENST00000439103 200 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RN7SL222P-201ENST00000476452 299 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 RN7SL97P-201ENST00000486780 299 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 EEF1A1P25-201ENST00000495704 1267 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 GAPDHP56-201ENST00000506031 988 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 PCBP2P3-201ENST00000509726 843 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 SNORA40.12-201ENST00000516329 111 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC018442.3-201ENST00000523025 183 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC079075.1-201ENST00000559543 878 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC068714.1-201ENST00000559623 800 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC008638.3-201ENST00000603341 463 ntBASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC7.24□□□□□ -1.25
ZC3H4Q9UPT8 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 TNPO1P2-201ENST00000426249 2665 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AL662795.2-201ENST00000624252 3706 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 HDAC1P2-201ENST00000453661 1398 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC096921.2-201ENST00000561507 1916 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 RNU6-1120P-201ENST00000362988 108 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 RNU6-251P-201ENST00000363235 104 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 Y_RNA.387-201ENST00000383918 102 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 MIR765-201ENST00000390226 114 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC005042.1-201ENST00000393397 800 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AL807761.1-201ENST00000417622 171 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC073069.1-201ENST00000428657 441 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 CEACAMP7-201ENST00000444105 496 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 RPL37P3-201ENST00000456825 293 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ST13P14-201ENST00000474095 734 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AL161747.1-201ENST00000480068 358 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 RPS21P4-201ENST00000487122 248 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 OR5M2P-201ENST00000529003 936 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ELOCP31-201ENST00000540463 467 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 PDCD5P1-201ENST00000543528 309 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 NELL2-211ENST00000548826 559 ntTSL 2 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 AC090312.1-201ENST00000580637 348 ntBASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
ZC3H4Q9UPT8 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MFSD8-219ENST00000641228 2559 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MTND4P35-201ENST00000604257 1375 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 DDX18P4-201ENST00000511690 1966 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 SNORA20.2-201ENST00000383922 131 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 RNU6-474P-201ENST00000384243 107 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 FAR2P2-201ENST00000413041 594 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 NDUFB4P5-201ENST00000415445 361 ntBASIC7.22□□□□□ -1.25
ZC3H4Q9UPT8 AL161631.1-201ENST00000417933 486 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms