Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL159169.1-201ENST00000421119 127 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 SEPT7P6-201ENST00000469999 1143 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC084357.1-201ENST00000473404 255 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 RANP9-201ENST00000519957 271 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 OR4C2P-201ENST00000530855 1064 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AL049634.3-201ENST00000604968 457 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC099676.1-201ENST00000608886 657 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC068724.3-201ENST00000625906 87 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 HSPA8P1-201ENST00000425843 1833 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 AC068647.1-201ENST00000489539 2265 ntBASIC3.44□□□□□ -1.86
VPS29Q9UBQ0 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LSM5-205ENST00000409952 687 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LSM5-206ENST00000409987 504 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 MTND4P22-201ENST00000413116 1169 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC092832.1-201ENST00000422934 400 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 ACTG1P13-201ENST00000486987 1043 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 UBE2CP3-201ENST00000502715 450 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 FTH1P24-201ENST00000503502 462 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC026784.1-201ENST00000507986 352 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 RNU6-319P-201ENST00000516025 108 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AP001180.3-201ENST00000582221 145 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 BNIP3P38-201ENST00000601117 544 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC010680.4-201ENST00000605334 543 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 uc_338.9-201ENST00000617424 182 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 RMST_5.1-201ENST00000618704 126 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC069209.1-201ENST00000619282 651 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AP003355.3-201ENST00000623465 114 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 AC138393.1-206ENST00000540997 1886 ntBASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
VPS29Q9UBQ0 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC017083.1-201ENST00000428093 483 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AL158071.1-201ENST00000430315 461 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC091390.1-201ENST00000433904 331 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 USP9YP7-201ENST00000436723 430 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 USP9YP32-201ENST00000452432 430 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 MTCYBP14-201ENST00000457471 715 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC023598.1-201ENST00000472521 361 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC103987.1-201ENST00000473394 348 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 RN7SKP21-201ENST00000516503 220 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AP006245.1-201ENST00000522549 120 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC007991.1-201ENST00000522680 631 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 AC022790.1-201ENST00000522872 204 ntBASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.42□□□□□ -1.86
VPS29Q9UBQ0 MIR3160-1-201ENST00000577972 85 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms