Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
CLCF1Q9UBD9 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 SLC2A3P1-201ENST00000519666 1451 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 SNORD74.4-201ENST00000364129 80 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RNA5SP97-201ENST00000365006 84 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RNU6-650P-201ENST00000365658 111 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RPL31P52-201ENST00000407532 367 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL450992.3-201ENST00000413192 568 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 NANOGP6-201ENST00000429190 847 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC007389.2-201ENST00000434630 306 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RPS3AP6-201ENST00000484430 795 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RPL21P129-201ENST00000491732 478 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 RN7SL323P-201ENST00000494712 295 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC025554.1-201ENST00000505641 188 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 MTND3P24-201ENST00000506306 329 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 IGKV2-38-201ENST00000517443 247 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 OSBPL9P3-201ENST00000534523 595 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC068446.3-201ENST00000555285 382 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL121594.4-201ENST00000556211 1196 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 MIR4716-201ENST00000579628 84 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 OR1AB1P-201ENST00000585564 761 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC025946.2-201ENST00000603398 234 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL139286.1-201ENST00000604465 483 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC245389.2-201ENST00000616023 576 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC242843.1-201ENST00000618702 573 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL139089.1-201ENST00000620372 975 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AC073530.2-201ENST00000623987 261 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL356094.1-201ENST00000624663 1212 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL773545.4-201ENST00000637262 310 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL513478.4-201ENST00000641636 310 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 AL133412.1-201ENST00000380194 2992 ntBASIC3.5□□□□□ -1.85
CLCF1Q9UBD9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 MTND5P11-201ENST00000511037 1812 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AL122126.1-201ENST00000546905 1318 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 OR11H5P-202ENST00000641612 1325 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 MIR30B-201ENST00000384850 88 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 SNORA48.7-201ENST00000391302 135 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 UBE2V1P11-201ENST00000411559 285 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AL121882.1-201ENST00000422893 417 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 RPL7P29-201ENST00000437151 728 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AL353748.1-201ENST00000440753 474 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 CYCSP53-201ENST00000455540 265 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 RPL21P11-201ENST00000461458 483 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 RPS20P21-201ENST00000466859 343 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AC087499.8-201ENST00000578406 226 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 ZNF92P2-201ENST00000600543 1059 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AC095038.2-201ENST00000621464 1070 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CLCF1Q9UBD9 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms