Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 OR1L1-202ENST00000373686 1083 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 SNORD116-12-201ENST00000384468 92 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC136624.1-201ENST00000400791 413 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 RNA5SP36-201ENST00000410197 133 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL157831.1-201ENST00000426134 473 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC002542.1-201ENST00000440683 193 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 BX248409.1-201ENST00000455497 255 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 RPL23AP65-201ENST00000475608 468 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC079203.1-201ENST00000487972 404 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC091167.1-201ENST00000492017 396 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC008958.1-201ENST00000511047 682 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 RNA5SP49-201ENST00000516450 115 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC008562.1-201ENST00000521763 330 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC124293.1-201ENST00000530034 493 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 MTND1P24-201ENST00000552175 861 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL442163.2-201ENST00000553912 710 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL132857.1-201ENST00000555180 708 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 RPL21P7-201ENST00000557463 483 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC011477.5-201ENST00000586571 259 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC002487.1-201ENST00000604565 994 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL590392.1-201ENST00000604960 446 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC024060.1-201ENST00000607052 494 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AP000238.1-201ENST00000608759 426 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC123768.4-201ENST00000616244 701 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 RMST_9.1-201ENST00000619945 193 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL109659.3-201ENST00000624985 950 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 AL592437.2-201ENST00000421655 2434 ntBASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.16□□□□□ -1.74
SPHK1Q9NYA1 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.74
SPHK1Q9NYA1 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
SPHK1Q9NYA1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 ANKRD36P1-201ENST00000344424 659 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 Y_RNA.472-201ENST00000384322 102 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 SNORD66.1-201ENST00000391230 76 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RN7SKP235-201ENST00000410662 305 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC092648.1-201ENST00000425870 423 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 HIGD1AP12-201ENST00000427832 281 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RPL7P4-203ENST00000430239 730 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RPL21P110-201ENST00000433345 446 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 NPM1P13-201ENST00000452663 865 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RN7SL385P-201ENST00000468873 276 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC015724.1-201ENST00000478577 156 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RN7SL817P-201ENST00000480777 288 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC105137.1-201ENST00000484355 562 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RPL35P6-201ENST00000490024 372 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 NDUFB4P12-201ENST00000513465 390 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC008494.2-201ENST00000514544 370 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 SNORD116-26-201ENST00000516006 96 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 RNA5SP519-201ENST00000516480 119 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 MIR4697-201ENST00000582977 78 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 VN1R88P-201ENST00000596787 292 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 IPO5P1-202ENST00000600039 287 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AL445435.1-201ENST00000604232 665 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC026368.1-201ENST00000614934 690 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AL445567.2-201ENST00000618935 498 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC123767.1-202ENST00000620407 817 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AC068787.1-201ENST00000623908 691 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 MIR3653-201ENST00000625572 110 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 ZNF663P-202ENST00000641770 1131 ntBASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SPHK1Q9NYA1 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms