Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 AC069157.1-201ENST00000421749 137 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 AC022022.1-201ENST00000430304 178 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 ARL4AP4-201ENST00000434170 518 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 PDSS1P2-201ENST00000449397 678 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 SNORA70.19-201ENST00000516717 90 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 HMGB1P23-201ENST00000518743 568 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 AC096586.2-201ENST00000610260 441 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.68□□□□□ -1.82
CISHQ9NSE2 AC018529.3-201ENST00000624212 2254 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 AL049555.1-201ENST00000562834 1933 ntBASIC3.68□□□□□ -1.82
CISHQ9NSE2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CISHQ9NSE2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CISHQ9NSE2 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CISHQ9NSE2 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CISHQ9NSE2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CISHQ9NSE2 MIR449B-201ENST00000384995 97 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 SNORA81-201ENST00000408493 178 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC245052.5-201ENST00000416320 649 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 BX842559.1-201ENST00000419615 532 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 RWDD4P2-201ENST00000426392 563 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 DPY19L1P2-201ENST00000426647 915 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 RPL21P110-201ENST00000433345 446 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC239367.2-201ENST00000447309 705 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC133473.1-201ENST00000455173 299 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 RWDD4P1-201ENST00000488019 565 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC026784.1-201ENST00000507986 352 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 PCBP2P3-201ENST00000509726 843 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 IGKV2-26-201ENST00000518305 343 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC007458.1-201ENST00000542812 373 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 MIR1254-2-201ENST00000579553 63 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 AL513302.2-201ENST00000562313 1842 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CISHQ9NSE2 AC012020.1-201ENST00000624541 1728 ntBASIC3.67□□□□□ -1.82
CISHQ9NSE2 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CISHQ9NSE2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 RMST-202ENST00000541282 2099 ntTSL 2 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL603766.1-201ENST00000407763 664 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 RN7SKP111-201ENST00000410349 271 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 RN7SKP27-201ENST00000410684 333 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC098592.2-201ENST00000413158 265 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AP000907.1-201ENST00000428428 510 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL365396.1-201ENST00000430854 671 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CISHQ9NSE2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC009263.1-201ENST00000441193 1239 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 RPL26P28-201ENST00000451325 435 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC106785.3-201ENST00000564064 847 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 MIR4429-201ENST00000580105 73 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC123786.2-201ENST00000603459 275 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL139286.1-201ENST00000604465 483 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AC092354.2-201ENST00000607786 514 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AP001486.2-201ENST00000561652 5113 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 AL031985.3-201ENST00000565390 2449 ntBASIC3.66□□□□□ -1.82
CISHQ9NSE2 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.66□□□□□ -1.82
CISHQ9NSE2 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
CISHQ9NSE2 AC092079.1-201ENST00000558620 1985 ntBASIC3.65□□□□□ -1.82
CISHQ9NSE2 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CISHQ9NSE2 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.65□□□□□ -1.82
CISHQ9NSE2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CISHQ9NSE2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 MIR490-201ENST00000384865 128 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 RNU2-65P-201ENST00000410162 185 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 RPL30P2-201ENST00000414021 291 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 Z99755.1-201ENST00000414048 380 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.65□□□□□ -1.83
CISHQ9NSE2 RPS6P12-201ENST00000432491 726 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 ELOCP10-201ENST00000440624 327 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 AC044797.1-201ENST00000445744 679 ntBASIC3.65□□□□□ -1.83
CISHQ9NSE2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CISHQ9NSE2 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms