Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AL358232.1-201ENST00000448030 501 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AL133477.1-201ENST00000457472 514 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 RPL9P32-201ENST00000464118 620 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 GAPDHP36-201ENST00000480688 918 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC078817.1-201ENST00000492623 435 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC108145.1-201ENST00000503770 153 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 MTCO1P30-201ENST00000515244 580 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 RNU6-760P-201ENST00000516078 97 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AP004242.1-201ENST00000533701 349 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC090751.1-201ENST00000566966 267 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC120057.2-201ENST00000571520 271 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC006270.2-201ENST00000578523 652 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 MIR6075-201ENST00000620782 95 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AC039056.2-201ENST00000622261 511 ntBASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
TM9SF3Q9HD45 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 MIR1183-201ENST00000408856 89 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 RBMY1KP-201ENST00000423480 476 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL691449.1-201ENST00000426570 421 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC018644.1-201ENST00000429934 551 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 RPL7P28-201ENST00000437739 740 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL138799.3-201ENST00000438968 350 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 RPS7P5-201ENST00000441482 581 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC068305.1-201ENST00000497406 726 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC017037.1-201ENST00000508460 471 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 NDUFB4P9-201ENST00000511646 388 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL360157.1-201ENST00000565962 87 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC107982.3-201ENST00000584957 985 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 HMGB1P50-201ENST00000605814 607 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC113194.1-201ENST00000606037 500 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC018754.1-201ENST00000607486 925 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 ATE1-AS1-202ENST00000636460 506 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AL627171.1-201ENST00000618845 1308 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 AC066616.2-201ENST00000559334 1481 ntBASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
TM9SF3Q9HD45 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 MTND5P3-201ENST00000438536 1800 ntBASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.76
TM9SF3Q9HD45 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 HMGB1P13-201ENST00000406019 642 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AL161631.1-201ENST00000417933 486 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 MTND2P21-201ENST00000436242 1042 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC006011.1-201ENST00000442758 349 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 RPL29P29-201ENST00000448725 423 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 RPL7P1-201ENST00000468161 747 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 RPL7P9-201ENST00000468715 747 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 RN7SL585P-201ENST00000470538 280 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC007688.1-201ENST00000475592 759 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 HSPA8P19-201ENST00000505359 1517 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 SOD1P3-201ENST00000518682 454 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC008562.1-201ENST00000521763 330 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 OR8L1P-201ENST00000534005 955 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC106871.1-201ENST00000568324 3102 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 AC007687.1-201ENST00000602704 304 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 CR392039.5-201ENST00000623201 510 ntBASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TM9SF3Q9HD45 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms