Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AL691449.1-201ENST00000426570 421 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RANP8-201ENST00000444720 713 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC093663.2-201ENST00000484625 313 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RPL7L1P13-201ENST00000511702 739 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 MIR2114-201ENST00000516645 80 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RN7SKP277-201ENST00000516895 283 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 MTND2P26-201ENST00000528255 1029 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC074029.1-201ENST00000552531 1044 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC025884.1-201ENST00000556034 378 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC005229.3-201ENST00000603438 323 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC112503.1-201ENST00000608436 391 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 MIR486-1-201ENST00000612171 68 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 RNU6-156P-201ENST00000621869 107 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 AC090617.9-201ENST00000623751 147 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 U6.107-201ENST00000637108 79 ntBASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
LRRC40Q9H9A6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 SNORD51.1-201ENST00000365405 77 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 SNORA70C-201ENST00000384538 135 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RNU1-89P-201ENST00000384592 164 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AL356095.1-201ENST00000417217 199 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RPS26P40-201ENST00000435209 294 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RPS17P13-201ENST00000448974 407 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RPL21P11-201ENST00000461458 483 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RPL7P19-201ENST00000469948 618 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RN7SKP122-201ENST00000515923 296 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC087369.1-201ENST00000520775 996 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 CIR1P1-201ENST00000524055 1133 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC091167.4-201ENST00000605079 184 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AC023043.4-201ENST00000612081 449 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 AL359535.1-201ENST00000612100 1087 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 MIR4496-201ENST00000635896 61 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 FAM157B-203ENST00000639350 358 ntBASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LRRC40Q9H9A6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC126755.2-208ENST00000327792 462 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC138969.1-213ENST00000331436 462 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 RNU4-6P-201ENST00000410804 122 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC093698.1-201ENST00000423843 571 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 OR4F13P-201ENST00000428478 931 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 HMGN2P21-201ENST00000447764 270 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 TVP23BP2-201ENST00000455082 615 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC146507.1-201ENST00000468335 354 ntBASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
LRRC40Q9H9A6 AC110792.1-201ENST00000491826 472 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms