Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 MTND1P37-201ENST00000636562 264 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 FAM157B-203ENST00000639350 358 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 ADAM5-202ENST00000399789 1942 ntBASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
BCAS3Q9H6U6 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC012078.1-201ENST00000405035 1646 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 SMG1P7-201ENST00000565246 2704 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RNU4-7P-201ENST00000364758 141 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RNA5SP87-201ENST00000384155 118 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RNU6-98P-201ENST00000384173 107 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RN7SKP285-201ENST00000410137 318 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 MTND1P14-201ENST00000427400 950 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 OFD1P12Y-201ENST00000427963 1207 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 VDAC1P6-201ENST00000430062 855 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL450263.2-201ENST00000439400 589 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC063943.1-201ENST00000465434 453 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RN7SL319P-201ENST00000480656 221 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC007686.1-201ENST00000488511 463 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 MTCYBP18-201ENST00000501056 747 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC046134.1-201ENST00000514454 666 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AP002453.2-201ENST00000533503 320 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC137768.1-201ENST00000549998 553 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC136618.2-201ENST00000575091 400 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 BPTFP1-201ENST00000579209 492 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 VN1R79P-201ENST00000593540 513 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 SEPT7P9-203ENST00000604116 343 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC007038.2-201ENST00000608095 740 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AL121757.2-201ENST00000611223 313 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 RPS4XP5-202ENST00000449995 1334 ntBASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BCAS3Q9H6U6 MTND5P17-201ENST00000418405 1603 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AL354685.2-201ENST00000448218 1447 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 MIR1284-201ENST00000408337 120 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 CBX1P3-201ENST00000413296 527 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 OR51A3P-201ENST00000413596 924 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AL034379.1-201ENST00000423216 253 ntBASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.66□□□□□ -1.5
BCAS3Q9H6U6 DPY19L1P2-201ENST00000426647 915 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.6 ms