Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 MIR1183-201ENST00000408856 89 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AMD1P2-201ENST00000412936 992 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AL691447.1-201ENST00000419456 387 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 CASP3P1-201ENST00000446037 609 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC006480.1-201ENST00000449887 378 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC239809.1-201ENST00000450470 217 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 MTCO3P20-201ENST00000454926 688 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC093853.1-201ENST00000515689 483 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC007991.1-201ENST00000522680 631 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC023161.2-201ENST00000551218 780 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC006946.3-201ENST00000609791 756 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AP006248.2-201ENST00000623309 592 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AC244205.2-202ENST00000635781 342 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 AL034408.1-202ENST00000636088 415 ntBASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
UPF3BQ9BZI7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 SNORA3.3-201ENST00000408712 125 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 DPY19L1P2-201ENST00000426647 915 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC091286.1-201ENST00000431233 461 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 VN1R96P-201ENST00000446052 858 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC098799.1-201ENST00000504752 800 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 RNA5SP164-201ENST00000516533 110 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 CBX3P5-201ENST00000552017 521 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 TRAV15-201ENST00000556680 249 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC018552.3-201ENST00000567416 561 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AL163642.2-201ENST00000604722 1019 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC017076.1-201ENST00000607613 578 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 AC116447.1-201ENST00000613153 453 ntBASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
UPF3BQ9BZI7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AC002075.2-201ENST00000425207 252 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL390879.2-203ENST00000426943 1121 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL591419.1-201ENST00000427423 339 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL645939.1-201ENST00000453429 797 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 PLGLA-201ENST00000465668 449 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 NPM1P17-201ENST00000479221 602 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 NPM1P52-201ENST00000518264 846 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 CYCSP30-201ENST00000546447 172 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AC123786.2-201ENST00000603459 275 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AC005972.3-201ENST00000606304 481 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AP001002.2-201ENST00000625137 386 ntBASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
UPF3BQ9BZI7 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms