Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 ZYXP1-201ENST00000617638 118 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 AC138915.3-201ENST00000562908 1389 ntBASIC3.1□□□□□ -1.91
ZNF439Q8NDP4 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 HSPE1P8-201ENST00000406997 288 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC009237.5-201ENST00000414271 501 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AL390879.2-203ENST00000426943 1121 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AL353898.1-201ENST00000444055 238 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC006480.1-201ENST00000449887 378 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 RN7SL385P-201ENST00000468873 276 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC010460.1-201ENST00000507087 466 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 RNU6-1231P-201ENST00000517185 103 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 MIR2116-201ENST00000517221 80 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC022695.1-201ENST00000522089 237 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 PARP1P2-201ENST00000556806 195 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AP003117.1-201ENST00000602771 554 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 LLPHP1-201ENST00000603571 367 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC119501.1-201ENST00000603646 475 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC006065.5-201ENST00000623427 349 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC116563.2-201ENST00000624751 535 ntBASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ZNF439Q8NDP4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.09□□□□□ -1.92
ZNF439Q8NDP4 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF439Q8NDP4 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF439Q8NDP4 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
ZNF439Q8NDP4 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 MIR320B1-201ENST00000390209 79 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC240504.1-201ENST00000395709 845 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 SOD2P1-201ENST00000396543 562 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC013404.1-201ENST00000413068 249 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AL691447.1-201ENST00000419456 387 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 TRGV7-201ENST00000427089 353 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 NEK4P1-201ENST00000433383 879 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 RN7SL330P-201ENST00000469709 307 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 RPL21P103-201ENST00000479921 488 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 VN1R105P-201ENST00000486595 910 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 RN7SL323P-201ENST00000494712 295 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 OR5D17P-201ENST00000531492 978 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 PDCL2P2-201ENST00000533651 189 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 CYCSP30-201ENST00000546447 172 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC099489.2-201ENST00000574976 260 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC022884.3-201ENST00000579571 248 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AC053481.4-201ENST00000583164 216 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 FP236240.3-201ENST00000623061 327 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 PWAR6-201ENST00000552334 4618 ntBASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
ZNF439Q8NDP4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms