Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC093767.1-201ENST00000504523 156 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 MTATP6P9-201ENST00000515039 680 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC100770.1-201ENST00000532310 322 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC092490.3-201ENST00000545370 572 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC008127.2-201ENST00000549925 1075 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 MIR3912-201ENST00000577566 105 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC068790.5-201ENST00000602741 355 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC023762.1-201ENST00000603280 584 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 RPL23AP92-201ENST00000603609 255 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC092954.1-201ENST00000609121 445 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AL627230.1-201ENST00000613077 211 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC231759.1-201ENST00000616455 597 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AL591926.8-201ENST00000616876 211 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC123767.1-202ENST00000620407 817 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 MTND2P41-201ENST00000637599 773 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 MKKS-204ENST00000639674 192 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 MFSD8-242ENST00000641690 4199 ntBASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC3.17□□□□□ -1.9
LINC01561Q8N1V8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC099654.2-201ENST00000433031 1980 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AP005901.5-201ENST00000545779 1796 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RN7SKP160-201ENST00000363804 340 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RNA5SP22-201ENST00000365393 109 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL589647.1-201ENST00000402485 466 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RNU2-28P-201ENST00000410457 189 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC062016.2-201ENST00000420950 676 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC007435.1-201ENST00000421086 415 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 HSFY1P1-201ENST00000423928 1178 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL035410.1-201ENST00000427409 427 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC068287.1-201ENST00000430283 295 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 GTF2IP3-201ENST00000433887 494 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 SEPT7P5-201ENST00000434048 306 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 PSMD10P3-201ENST00000437000 448 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RPS24P6-201ENST00000452670 400 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 FCF1P6-201ENST00000456841 595 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RPS20P24-201ENST00000457473 361 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 snoU109.4-201ENST00000458953 143 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 IGLV2-34-201ENST00000490007 283 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MTCYBP16-201ENST00000509187 1129 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 NDUFB4P9-201ENST00000511646 388 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 MTATP6P1-201ENST00000514057 681 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RNA5SP446-201ENST00000515955 82 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RNU6-276P-201ENST00000516114 96 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 RNA5SP154-201ENST00000516193 111 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC109635.4-202ENST00000531666 412 ntBASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.16□□□□□ -1.9
LINC01561Q8N1V8 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms