Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL022393.1-201ENST00000625142 1677 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC108938.1-201ENST00000451204 136 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AL136097.1-201ENST00000456945 913 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 SNRPCP3-201ENST00000474888 476 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC025554.1-201ENST00000505641 188 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 PPBPP1-201ENST00000510807 373 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 RNA5SP24-201ENST00000516478 95 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 RN7SKP244-201ENST00000516513 307 ntBASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
RIF1Q5UIP0 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 MAPK10-372ENST00000641954 3413 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 RPS17P11-201ENST00000474297 293 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC017037.2-201ENST00000513850 890 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 RN7SKP46-201ENST00000515942 234 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC106734.1-201ENST00000568646 663 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC245100.7-201ENST00000609678 442 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AL590808.1-201ENST00000618696 141 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 SAGE2P-201ENST00000420011 2126 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 SDCBPP2-201ENST00000424643 885 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC000041.1-201ENST00000439655 175 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 AC098824.1-201ENST00000453565 980 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 RNA5SP230-201ENST00000517039 122 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 MIR4425-201ENST00000580572 84 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 MIR7843-201ENST00000622274 79 ntBASIC3.31□□□□□ -1.88
RIF1Q5UIP0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RIF1Q5UIP0 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC027287.1-201ENST00000553115 1453 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 BMS1P22-201ENST00000414726 313 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 BX276092.3-201ENST00000424182 230 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AL133477.1-201ENST00000457472 514 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC124856.1-201ENST00000600819 896 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC128687.2-201ENST00000609657 566 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC231759.1-201ENST00000616455 597 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AL079342.1-201ENST00000401460 267 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 RPL5P2-201ENST00000429598 854 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC128716.1-201ENST00000475129 166 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC005476.1-201ENST00000554427 397 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC090877.1-201ENST00000561418 344 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 AC008759.1-201ENST00000589783 983 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RIF1Q5UIP0 DDX18P4-201ENST00000511690 1966 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 DDX6P1-205ENST00000441966 1436 ntBASIC3.3□□□□□ -1.88
RIF1Q5UIP0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RIF1Q5UIP0 RNU4-47P-201ENST00000410876 114 ntBASIC3.29□□□□□ -1.88
RIF1Q5UIP0 AL513477.1-202ENST00000417061 214 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms