Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC010198.2-201ENST00000550612 259 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 HMGB3P26-201ENST00000560051 582 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 MIR4458-201ENST00000578872 75 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC245036.5-201ENST00000596330 847 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC091946.2-201ENST00000606105 291 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AC010424.2-201ENST00000607594 443 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 IRF5P1-201ENST00000504852 2164 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC38Q502W7 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC38Q502W7 AL445487.1-201ENST00000415694 1580 ntBASIC4.91□□□□□ -1.62
CCDC38Q502W7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CCDC38Q502W7 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC38Q502W7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC38Q502W7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CCDC38Q502W7 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CCDC38Q502W7 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 Y_RNA.25-201ENST00000362528 102 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 RNU1-20P-201ENST00000363314 162 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC119751.3-201ENST00000399720 670 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AL645733.1-201ENST00000402250 217 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 Z97832.1-201ENST00000402490 328 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AL008987.1-201ENST00000415528 237 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 SDCBPP2-201ENST00000424643 885 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 COX6CP15-201ENST00000426313 211 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AL050321.1-201ENST00000432363 400 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 ATP5F1P1-201ENST00000433775 569 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 RPL7P11-201ENST00000437586 658 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 FGF7P5-201ENST00000441829 291 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC073850.1-201ENST00000449243 255 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 MTCO3P2-201ENST00000457365 171 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AL133477.1-201ENST00000457472 514 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC013828.1-201ENST00000481845 158 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 RN7SL808P-201ENST00000496066 299 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC140172.1-201ENST00000502928 141 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC109445.1-201ENST00000512356 383 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC110775.1-201ENST00000513721 462 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 LSM6P2-201ENST00000552208 177 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 SULT1C2P1-202ENST00000562418 459 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC080013.3-201ENST00000606839 578 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AP003392.5-201ENST00000607857 415 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 EIF3FP1-201ENST00000613970 806 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC009464.1-201ENST00000615731 469 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 AC099654.2-201ENST00000433031 1980 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CCDC38Q502W7 EIF2AP4-201ENST00000424793 1781 ntBASIC4.9□□□□□ -1.63
CCDC38Q502W7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CCDC38Q502W7 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 Z73965.1-201ENST00000623412 2297 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 CDR1-202ENST00000625883 1485 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 ZNF33CP-201ENST00000432492 2030 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 FAM133CP-201ENST00000332869 704 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC38Q502W7 Y_RNA.408-201ENST00000383987 102 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 MIR506-201ENST00000384998 124 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 MIR708-201ENST00000390708 88 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 GLULP6-201ENST00000399502 913 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 SSXP10-201ENST00000402595 565 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL080315.1-201ENST00000406055 466 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 RPL23AP48-201ENST00000406913 488 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC073264.1-201ENST00000411508 416 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 VDAC1P9-201ENST00000412766 841 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 GTF2IP5-201ENST00000414608 731 ntBASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.89□□□□□ -1.63
CCDC38Q502W7 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms