Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC3.33□□□□□ -1.88
USF2Q15853 NTAN1P1-201ENST00000603150 646 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AC115286.1-201ENST00000604298 434 ntBASIC3.33□□□□□ -1.88
USF2Q15853 SNORA51-201ENST00000606420 132 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AC084036.1-201ENST00000609190 508 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AL021997.2-201ENST00000615674 271 ntBASIC3.33□□□□□ -1.88
USF2Q15853 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 AP001350.1-201ENST00000601906 1524 ntBASIC3.33□□□□□ -1.88
USF2Q15853 AL592148.3-201ENST00000608771 2646 ntBASIC3.33□□□□□ -1.88
USF2Q15853 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.33□□□□□ -1.88
USF2Q15853 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
USF2Q15853 AL672296.1-201ENST00000427780 2158 ntBASIC3.32□□□□□ -1.88
USF2Q15853 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USF2Q15853 OR4K15-201ENST00000305051 1216 ntBASIC3.32□□□□□ -1.88
USF2Q15853 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USF2Q15853 RNA5SP175-201ENST00000364275 119 ntBASIC3.32□□□□□ -1.88
USF2Q15853 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
USF2Q15853 RNU4-74P-201ENST00000411280 161 ntBASIC3.32□□□□□ -1.88
USF2Q15853 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 TMSB10P2-201ENST00000416049 131 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AL590139.1-201ENST00000416267 400 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 AL161631.1-201ENST00000417933 486 ntBASIC3.32□□□□□ -1.88
USF2Q15853 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.32□□□□□ -1.88
USF2Q15853 RPEP3-201ENST00000425462 676 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AL138878.2-201ENST00000440581 1241 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 CEACAMP9-201ENST00000442990 513 ntBASIC3.32□□□□□ -1.88
USF2Q15853 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 RAD1P2-201ENST00000446414 663 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC073264.2-201ENST00000448886 166 ntBASIC3.32□□□□□ -1.88
USF2Q15853 PTGES3P5-201ENST00000455109 434 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC004801.2-202ENST00000463559 283 ntBASIC3.32□□□□□ -1.88
USF2Q15853 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 AC006463.2-201ENST00000473326 348 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC006517.1-201ENST00000480485 328 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 MTND4LP22-201ENST00000508209 276 ntBASIC3.32□□□□□ -1.88
USF2Q15853 RN7SKP96-201ENST00000516948 297 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 IGKV2D-19-201ENST00000523346 262 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 AC139103.1-201ENST00000534696 1030 ntBASIC3.32□□□□□ -1.88
USF2Q15853 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.32□□□□□ -1.88
USF2Q15853 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.32□□□□□ -1.88
USF2Q15853 MTCO3P24-201ENST00000572729 782 ntBASIC3.32□□□□□ -1.88
USF2Q15853 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.32□□□□□ -1.88
USF2Q15853 MIR4330-201ENST00000579077 105 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.32□□□□□ -1.88
USF2Q15853 SUMO2P14-201ENST00000604488 293 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AL354984.3-201ENST00000604803 325 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC016877.3-201ENST00000606778 504 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC012409.3-201ENST00000611343 981 ntBASIC3.32□□□□□ -1.88
USF2Q15853 MIR6780A-201ENST00000615089 68 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC024023.1-201ENST00000624530 922 ntBASIC3.32□□□□□ -1.88
USF2Q15853 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.32□□□□□ -1.88
USF2Q15853 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USF2Q15853 AC244205.2-202ENST00000635781 342 ntBASIC3.32□□□□□ -1.88
USF2Q15853 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.32□□□□□ -1.88
USF2Q15853 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
USF2Q15853 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.32□□□□□ -1.88
USF2Q15853 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
USF2Q15853 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
USF2Q15853 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
USF2Q15853 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 BDP1P-201ENST00000582658 1990 ntBASIC3.31□□□□□ -1.88
USF2Q15853 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.31□□□□□ -1.88
USF2Q15853 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
USF2Q15853 ZNF542P-204ENST00000482727 1305 ntBASIC3.31□□□□□ -1.88
USF2Q15853 MIR331-201ENST00000362302 94 ntBASIC3.31□□□□□ -1.88
USF2Q15853 RNA5SP332-201ENST00000391063 115 ntBASIC3.31□□□□□ -1.88
USF2Q15853 CYB5AP4-201ENST00000396692 399 ntBASIC3.31□□□□□ -1.88
USF2Q15853 MIR1250-201ENST00000408098 113 ntBASIC3.31□□□□□ -1.88
USF2Q15853 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 RPL30P2-201ENST00000414021 291 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
USF2Q15853 EIF1P3-201ENST00000423841 334 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.31□□□□□ -1.88
USF2Q15853 AL132765.1-201ENST00000434165 553 ntBASIC3.31□□□□□ -1.88
USF2Q15853 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.31□□□□□ -1.88
USF2Q15853 RPL7P59-201ENST00000447700 943 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AL513533.1-201ENST00000453728 415 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.31□□□□□ -1.88
USF2Q15853 AC126121.1-201ENST00000482313 553 ntBASIC3.31□□□□□ -1.88
USF2Q15853 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms