Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC012065.4-201ENST00000602445 679 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AL133338.2-201ENST00000604292 736 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC090948.2-201ENST00000607363 564 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC103710.4-201ENST00000609301 899 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC100793.4-201ENST00000613683 429 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC008121.2-201ENST00000614647 523 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC025588.4-201ENST00000615802 908 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 AC100827.5-201ENST00000615883 426 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 OR52B5P-202ENST00000641118 1110 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX6-1P78426 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
NKX6-1P78426 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX6-1P78426 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
NKX6-1P78426 AC023421.1-201ENST00000590535 1785 ntBASIC4.81□□□□□ -1.64
NKX6-1P78426 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
NKX6-1P78426 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX6-1P78426 RNA5SP183-201ENST00000362452 119 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 RNU5F-6P-201ENST00000362979 116 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 AL031679.1-201ENST00000400616 525 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 MTCYBP36-201ENST00000404146 440 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC096921.1-201ENST00000411661 375 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 TPMTP2-201ENST00000414372 726 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 UBTFL3-201ENST00000418934 1024 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 OR10T1P-201ENST00000424327 947 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 NPM1P34-201ENST00000428821 893 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 TMEM183AP1-205ENST00000432739 290 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC006466.1-201ENST00000438721 289 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 RPL36AP15-201ENST00000444514 266 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 OR52J1P-201ENST00000450596 932 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 SNRPFP4-201ENST00000456366 242 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 SUMO2P2-201ENST00000456482 255 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 UBTFL6-201ENST00000477929 1024 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AP000797.1-201ENST00000478870 387 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 HMGB1P21-201ENST00000502313 581 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC024589.1-201ENST00000512207 263 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC025881.1-201ENST00000518851 512 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AP000676.2-201ENST00000529711 301 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.8□□□□□ -1.64
NKX6-1P78426 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 MIR3691-201ENST00000578066 90 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX6-1P78426 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC078795.2-201ENST00000602835 1252 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC080078.2-201ENST00000603766 501 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 TAS2R6P-201ENST00000605022 826 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AC126915.2-201ENST00000610957 190 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 AC007786.3-201ENST00000615154 596 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX6-1P78426 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 AP002505.2-201ENST00000623585 696 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX6-1P78426 NEAT1-202ENST00000501122 22743 ntBASIC4.8□□□□□ -1.64
NKX6-1P78426 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
NKX6-1P78426 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX6-1P78426 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
NKX6-1P78426 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
NKX6-1P78426 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms