Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC106782.4-201ENST00000568264 210 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC012603.1-201ENST00000606424 528 ntBASIC4.38□□□□□ -1.71
VCPP55072 FAM27D1-201ENST00000612308 341 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC078899.5-201ENST00000612475 178 ntBASIC4.38□□□□□ -1.71
VCPP55072 CR589904.2-201ENST00000612533 440 ntBASIC4.38□□□□□ -1.71
VCPP55072 AL442067.2-201ENST00000614033 363 ntBASIC4.38□□□□□ -1.71
VCPP55072 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 MIR4727-201ENST00000622232 55 ntBASIC4.38□□□□□ -1.71
VCPP55072 AL356490.1-201ENST00000623079 479 ntBASIC4.38□□□□□ -1.71
VCPP55072 AC015726.3-201ENST00000624501 418 ntBASIC4.38□□□□□ -1.71
VCPP55072 AP001002.2-201ENST00000625137 386 ntBASIC4.38□□□□□ -1.71
VCPP55072 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.38□□□□□ -1.71
VCPP55072 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.38□□□□□ -1.71
VCPP55072 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VCPP55072 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VCPP55072 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VCPP55072 RN7SKP182-201ENST00000410772 298 ntBASIC4.37□□□□□ -1.71
VCPP55072 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.37□□□□□ -1.71
VCPP55072 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.37□□□□□ -1.71
VCPP55072 MTND2P25-201ENST00000449028 610 ntBASIC4.37□□□□□ -1.71
VCPP55072 RPL23AP81-201ENST00000455252 467 ntBASIC4.37□□□□□ -1.71
VCPP55072 RPS29P19-201ENST00000479709 171 ntBASIC4.37□□□□□ -1.71
VCPP55072 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.37□□□□□ -1.71
VCPP55072 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
VCPP55072 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VCPP55072 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.37□□□□□ -1.71
VCPP55072 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.37□□□□□ -1.71
VCPP55072 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.37□□□□□ -1.71
VCPP55072 AC026368.1-201ENST00000614934 690 ntBASIC4.37□□□□□ -1.71
VCPP55072 AC011472.4-201ENST00000615848 491 ntBASIC4.37□□□□□ -1.71
VCPP55072 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VCPP55072 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.37□□□□□ -1.71
VCPP55072 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VCPP55072 AL139811.1-201ENST00000424779 2299 ntBASIC4.37□□□□□ -1.71
VCPP55072 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.36□□□□□ -1.71
VCPP55072 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.36□□□□□ -1.71
VCPP55072 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
VCPP55072 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 SNORA62.2-201ENST00000364672 152 ntBASIC4.36□□□□□ -1.71
VCPP55072 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 RANP4-201ENST00000413361 655 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.36□□□□□ -1.71
VCPP55072 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC4.36□□□□□ -1.71
VCPP55072 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.36□□□□□ -1.71
VCPP55072 AL031663.1-201ENST00000437445 219 ntBASIC4.36□□□□□ -1.71
VCPP55072 CYCSP43-201ENST00000438233 310 ntBASIC4.36□□□□□ -1.71
VCPP55072 CBX1P4-201ENST00000439415 457 ntBASIC4.36□□□□□ -1.71
VCPP55072 XKRY2-201ENST00000442362 1093 ntBASIC4.36□□□□□ -1.71
VCPP55072 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.36□□□□□ -1.71
VCPP55072 AC006499.5-201ENST00000505037 514 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC108120.2-201ENST00000512973 294 ntBASIC4.36□□□□□ -1.71
VCPP55072 HNRNPKP5-201ENST00000515300 253 ntBASIC4.36□□□□□ -1.71
VCPP55072 SOD1P3-201ENST00000518682 454 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.36□□□□□ -1.71
VCPP55072 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.36□□□□□ -1.71
VCPP55072 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.36□□□□□ -1.71
VCPP55072 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.36□□□□□ -1.71
VCPP55072 AC063950.1-201ENST00000552036 308 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.36□□□□□ -1.71
VCPP55072 AP003117.1-201ENST00000602771 554 ntBASIC4.36□□□□□ -1.71
VCPP55072 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC4.36□□□□□ -1.71
VCPP55072 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.36□□□□□ -1.71
VCPP55072 AC242628.1-201ENST00000606810 391 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC073592.7-201ENST00000623659 507 ntBASIC4.36□□□□□ -1.71
VCPP55072 AC009501.3-201ENST00000605001 1352 ntBASIC4.36□□□□□ -1.71
VCPP55072 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.36□□□□□ -1.71
VCPP55072 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.36□□□□□ -1.71
VCPP55072 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VCPP55072 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VCPP55072 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VCPP55072 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VCPP55072 ZNF285B-201ENST00000561698 1767 ntBASIC4.35□□□□□ -1.71
VCPP55072 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VCPP55072 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
VCPP55072 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VCPP55072 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VCPP55072 SNORD51.1-201ENST00000365405 77 ntBASIC4.35□□□□□ -1.71
VCPP55072 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.35□□□□□ -1.71
VCPP55072 MIR3074-201ENST00000384885 81 ntBASIC4.35□□□□□ -1.71
VCPP55072 Z86062.1-201ENST00000406773 777 ntBASIC4.35□□□□□ -1.71
VCPP55072 UBE2V1P15-201ENST00000407776 448 ntBASIC4.35□□□□□ -1.71
VCPP55072 RNU4-6P-201ENST00000410804 122 ntBASIC4.35□□□□□ -1.71
VCPP55072 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.35□□□□□ -1.71
VCPP55072 OR4K6P-201ENST00000416478 897 ntBASIC4.35□□□□□ -1.71
VCPP55072 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.35□□□□□ -1.71
VCPP55072 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VCPP55072 MTATP6P11-201ENST00000428071 670 ntBASIC4.35□□□□□ -1.71
VCPP55072 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.35□□□□□ -1.71
VCPP55072 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.35□□□□□ -1.71
VCPP55072 AC023512.1-201ENST00000444513 499 ntBASIC4.35□□□□□ -1.71
VCPP55072 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.35□□□□□ -1.71
VCPP55072 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.35□□□□□ -1.71
VCPP55072 MTCO1P31-201ENST00000506355 492 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms