Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR600-201ENST00000385007 98 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 RNU6-332P-201ENST00000391193 108 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 GSTA9P-201ENST00000406231 611 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 MIR1284-201ENST00000408337 120 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 RNU2-42P-201ENST00000410697 113 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 MTCO1P20-201ENST00000425366 358 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AP001324.1-201ENST00000428553 399 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC073465.2-201ENST00000440938 498 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC092757.1-201ENST00000467293 467 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC5.59□□□□□ -1.51
EPHB3P54753 SAP18P1-201ENST00000512058 390 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.59□□□□□ -1.51
EPHB3P54753 IGJP1-201ENST00000522682 475 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 OR5M7P-201ENST00000526140 972 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 OR6C73P-201ENST00000546432 358 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 RPS3AP23-202ENST00000574601 686 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 AC011447.4-201ENST00000587562 111 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.59□□□□□ -1.51
EPHB3P54753 AC027807.2-201ENST00000616099 408 ntBASIC5.59□□□□□ -1.51
EPHB3P54753 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
EPHB3P54753 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
EPHB3P54753 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
EPHB3P54753 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
EPHB3P54753 GVINP1-202ENST00000531871 7271 ntBASIC5.59□□□□□ -1.52
EPHB3P54753 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.59□□□□□ -1.52
EPHB3P54753 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
EPHB3P54753 AC133552.1-201ENST00000569988 4007 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 AC079097.1-201ENST00000512187 1399 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 MIR137-201ENST00000385223 102 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.58□□□□□ -1.52
EPHB3P54753 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 RNU6-77P-201ENST00000410554 91 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC068533.2-201ENST00000411872 306 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 FCF1P2-201ENST00000415284 583 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC093084.1-201ENST00000424233 687 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 HMGB3P10-201ENST00000434734 572 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 CYCSP11-201ENST00000436426 315 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AL772161.1-201ENST00000439130 476 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 AL353093.1-201ENST00000441292 436 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 COX6CP18-201ENST00000448769 222 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.58□□□□□ -1.52
EPHB3P54753 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 NIPA2P5-201ENST00000452282 464 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 RAD23BP3-201ENST00000454157 1152 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 BX284632.1-201ENST00000478218 541 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC058823.1-201ENST00000485315 474 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 RPL7P38-201ENST00000488396 739 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 HMGB1P29-201ENST00000505659 499 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC5.58□□□□□ -1.52
EPHB3P54753 GLUD1P3-202ENST00000508551 200 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 FGF7P4-201ENST00000509595 295 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 ARL2BPP2-201ENST00000550907 489 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 CBX3P5-201ENST00000552017 521 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 MIR4795-201ENST00000584182 89 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.58□□□□□ -1.52
EPHB3P54753 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC5.58□□□□□ -1.52
EPHB3P54753 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 Z98200.1-201ENST00000607298 470 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC133644.2-201ENST00000608142 540 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.58□□□□□ -1.52
EPHB3P54753 AC006065.6-201ENST00000625201 545 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 MIR1321-201ENST00000637766 79 ntBASIC5.58□□□□□ -1.52
EPHB3P54753 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
EPHB3P54753 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.58□□□□□ -1.52
EPHB3P54753 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
EPHB3P54753 AC015799.1-201ENST00000622996 3122 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms