Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
CLTCL1P53675 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.84□□□□□ -1.64
CLTCL1P53675 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
CLTCL1P53675 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.83□□□□□ -1.64
CLTCL1P53675 SCN1A-220ENST00000641603 12506 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC4.83□□□□□ -1.64
CLTCL1P53675 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLTCL1P53675 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.83□□□□□ -1.64
CLTCL1P53675 FCF1P3-201ENST00000496394 590 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 OR4R3P-201ENST00000525084 838 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.83□□□□□ -1.64
CLTCL1P53675 AC135507.2-201ENST00000612443 309 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 AC100793.4-201ENST00000613683 429 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.83□□□□□ -1.64
CLTCL1P53675 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLTCL1P53675 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
CLTCL1P53675 GCNT6-201ENST00000379591 934 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 AC006989.1-201ENST00000427212 131 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 UBE2DNL-203ENST00000474922 222 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 RPS3AP14-201ENST00000483907 780 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 RNA5SP341-201ENST00000516261 117 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 AC024224.1-201ENST00000538284 609 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 EIF4BP1-201ENST00000554881 351 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.83□□□□□ -1.64
CLTCL1P53675 RNVU1-4-201ENST00000612985 164 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.83□□□□□ -1.64
CLTCL1P53675 AC119744.1-201ENST00000454746 1715 ntBASIC4.83□□□□□ -1.64
CLTCL1P53675 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLTCL1P53675 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLTCL1P53675 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLTCL1P53675 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 MIR1289-1-201ENST00000408836 144 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 HMGN1P24-201ENST00000412282 298 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.82□□□□□ -1.64
CLTCL1P53675 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLTCL1P53675 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC4.82□□□□□ -1.64
CLTCL1P53675 RPL23AP69-201ENST00000431134 458 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 MTCO1P45-201ENST00000431457 267 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 NANOGNBP1-201ENST00000448444 480 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 MTND2P25-201ENST00000449028 610 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.82□□□□□ -1.64
CLTCL1P53675 AP001486.1-201ENST00000463339 476 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 AL121576.1-201ENST00000556055 276 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.82□□□□□ -1.64
CLTCL1P53675 AL158196.1-201ENST00000616786 434 ntBASIC4.82□□□□□ -1.64
CLTCL1P53675 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLTCL1P53675 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLTCL1P53675 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CLTCL1P53675 NCAPGP1-201ENST00000505112 1814 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.81□□□□□ -1.64
CLTCL1P53675 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLTCL1P53675 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.81□□□□□ -1.64
CLTCL1P53675 AC236972.1-201ENST00000433225 199 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 RN7SL93P-201ENST00000463035 293 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 APOOP4-201ENST00000513530 597 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 AC006946.3-201ENST00000609791 756 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 PCA3_2.1-201ENST00000612507 409 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.81□□□□□ -1.64
CLTCL1P53675 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.81□□□□□ -1.64
CLTCL1P53675 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.81□□□□□ -1.64
CLTCL1P53675 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLTCL1P53675 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
CLTCL1P53675 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLTCL1P53675 AL513302.2-201ENST00000562313 1842 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 AF117829.1-206ENST00000621883 3802 ntBASIC4.81□□□□□ -1.64
CLTCL1P53675 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CLTCL1P53675 OR10J6P-201ENST00000289731 930 ntBASIC4.8□□□□□ -1.64
CLTCL1P53675 RNU1-89P-201ENST00000384592 164 ntBASIC4.8□□□□□ -1.64
CLTCL1P53675 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLTCL1P53675 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.8□□□□□ -1.64
CLTCL1P53675 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.8□□□□□ -1.64
CLTCL1P53675 RN7SL863P-201ENST00000462370 296 ntBASIC4.8□□□□□ -1.64
CLTCL1P53675 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLTCL1P53675 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.8□□□□□ -1.64
CLTCL1P53675 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
CLTCL1P53675 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.8□□□□□ -1.64
CLTCL1P53675 AC022146.1-201ENST00000595307 847 ntBASIC4.8□□□□□ -1.64
CLTCL1P53675 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.8□□□□□ -1.64
CLTCL1P53675 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.8□□□□□ -1.64
CLTCL1P53675 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.8□□□□□ -1.64
CLTCL1P53675 CR381670.1-201ENST00000624291 1693 ntBASIC4.8□□□□□ -1.64
CLTCL1P53675 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLTCL1P53675 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.8□□□□□ -1.64
CLTCL1P53675 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.8□□□□□ -1.64
CLTCL1P53675 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CLTCL1P53675 RNA5SP235-201ENST00000365411 114 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CLTCL1P53675 U3.26-201ENST00000391236 204 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 UBA52P6-201ENST00000399822 382 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 RNA5SP296-201ENST00000410523 111 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.79□□□□□ -1.64
CLTCL1P53675 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.79□□□□□ -1.64
CLTCL1P53675 RPL7P44-201ENST00000424827 742 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 AP001992.1-205ENST00000462248 379 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 RPL7P23-201ENST00000493874 747 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.79□□□□□ -1.64
CLTCL1P53675 HIGD1AP1-201ENST00000550979 275 ntBASIC4.79□□□□□ -1.64
CLTCL1P53675 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.79□□□□□ -1.64
CLTCL1P53675 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.79□□□□□ -1.64
CLTCL1P53675 ATP5A1P2-202ENST00000616464 443 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms