Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MRE11P49959 RNU1-43P-201ENST00000365052 165 ntBASIC5.73□□□□□ -1.49
MRE11P49959 RNU4-2-201ENST00000365668 141 ntBASIC5.73□□□□□ -1.49
MRE11P49959 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MRE11P49959 AL121834.1-202ENST00000404494 277 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.73□□□□□ -1.49
MRE11P49959 PAICSP7-201ENST00000419829 962 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AL389915.1-201ENST00000422463 466 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AC093084.1-201ENST00000424233 687 ntBASIC5.73□□□□□ -1.49
MRE11P49959 CENPIP1-201ENST00000425713 902 ntBASIC5.73□□□□□ -1.49
MRE11P49959 CNOT7P1-201ENST00000429006 852 ntBASIC5.73□□□□□ -1.49
MRE11P49959 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
MRE11P49959 PPIAP13-201ENST00000434706 478 ntBASIC5.73□□□□□ -1.49
MRE11P49959 MTATP6P13-201ENST00000438531 667 ntBASIC5.73□□□□□ -1.49
MRE11P49959 RPL23AP76-201ENST00000441860 458 ntBASIC5.73□□□□□ -1.49
MRE11P49959 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.73□□□□□ -1.49
MRE11P49959 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
MRE11P49959 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 AC091959.2-201ENST00000477363 321 ntBASIC5.73□□□□□ -1.49
MRE11P49959 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.73□□□□□ -1.49
MRE11P49959 LTV1P1-201ENST00000510683 1237 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AC008837.2-201ENST00000513076 418 ntBASIC5.73□□□□□ -1.49
MRE11P49959 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.73□□□□□ -1.49
MRE11P49959 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC5.73□□□□□ -1.49
MRE11P49959 AGGF1P8-201ENST00000562979 1000 ntBASIC5.73□□□□□ -1.49
MRE11P49959 MRPS21P7-201ENST00000566937 238 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AC079171.1-201ENST00000568788 914 ntBASIC5.73□□□□□ -1.49
MRE11P49959 MIR3912-201ENST00000577566 105 ntBASIC5.73□□□□□ -1.49
MRE11P49959 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC5.73□□□□□ -1.49
MRE11P49959 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC5.73□□□□□ -1.49
MRE11P49959 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 AC015804.1-201ENST00000622935 435 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AL356121.2-201ENST00000624715 780 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.73□□□□□ -1.49
MRE11P49959 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
MRE11P49959 IRF5P1-201ENST00000504852 2164 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AL121950.1-201ENST00000624993 2077 ntBASIC5.73□□□□□ -1.49
MRE11P49959 AL355852.1-201ENST00000454081 1771 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AP005901.5-201ENST00000545779 1796 ntBASIC5.72□□□□□ -1.49
MRE11P49959 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.72□□□□□ -1.49
MRE11P49959 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 EOGT-210ENST00000615922 1931 ntBASIC5.72□□□□□ -1.49
MRE11P49959 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 RNA5SP123-201ENST00000363244 119 ntBASIC5.72□□□□□ -1.49
MRE11P49959 RNA5SP505-201ENST00000364748 108 ntBASIC5.72□□□□□ -1.49
MRE11P49959 RNU4-7P-201ENST00000364758 141 ntBASIC5.72□□□□□ -1.49
MRE11P49959 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 AL359837.1-201ENST00000381357 287 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC093719.1-202ENST00000392735 373 ntBASIC5.72□□□□□ -1.49
MRE11P49959 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.72□□□□□ -1.49
MRE11P49959 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC5.72□□□□□ -1.49
MRE11P49959 RNU2-16P-201ENST00000410712 136 ntBASIC5.72□□□□□ -1.49
MRE11P49959 RNU6-920P-201ENST00000410926 92 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AL663109.1-201ENST00000411498 844 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AL160275.2-201ENST00000412010 394 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC019050.1-201ENST00000418508 492 ntBASIC5.72□□□□□ -1.49
MRE11P49959 MTCO2P34-201ENST00000421994 607 ntBASIC5.72□□□□□ -1.49
MRE11P49959 PDSS1P1-201ENST00000422953 1114 ntBASIC5.72□□□□□ -1.49
MRE11P49959 RPL18P10-201ENST00000425606 538 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC5.72□□□□□ -1.49
MRE11P49959 AC002542.1-201ENST00000440683 193 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC019185.1-201ENST00000442718 389 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 MTCYBP1-201ENST00000454315 1119 ntBASIC5.72□□□□□ -1.49
MRE11P49959 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.72□□□□□ -1.49
MRE11P49959 SETP11-201ENST00000473027 690 ntBASIC5.72□□□□□ -1.49
MRE11P49959 CDH12P2-201ENST00000504393 298 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC091965.2-201ENST00000512324 613 ntBASIC5.72□□□□□ -1.49
MRE11P49959 SCARNA13-201ENST00000516672 275 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.72□□□□□ -1.49
MRE11P49959 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.72□□□□□ -1.49
MRE11P49959 EIF1P4-201ENST00000572664 335 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.72□□□□□ -1.49
MRE11P49959 AC011260.1-201ENST00000578420 472 ntBASIC5.72□□□□□ -1.49
MRE11P49959 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 WISP1-OT1-201ENST00000602893 642 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AL137072.1-201ENST00000603444 466 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC103792.1-201ENST00000603591 919 ntBASIC5.72□□□□□ -1.49
MRE11P49959 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.72□□□□□ -1.49
MRE11P49959 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.72□□□□□ -1.49
MRE11P49959 AC099676.1-201ENST00000608886 657 ntBASIC5.72□□□□□ -1.49
MRE11P49959 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
MRE11P49959 AL118522.2-201ENST00000616045 615 ntBASIC5.72□□□□□ -1.49
MRE11P49959 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
MRE11P49959 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.72□□□□□ -1.49
MRE11P49959 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.72□□□□□ -1.49
MRE11P49959 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms