Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 SNORA67-201ENST00000384423 137 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC005522.1-201ENST00000395416 346 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AL359643.1-201ENST00000404109 423 ntBASIC4.36□□□□□ -1.71
SOX2P48431 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 SNORA77-201ENST00000408716 125 ntBASIC4.36□□□□□ -1.71
SOX2P48431 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 RNU2-50P-201ENST00000410494 143 ntBASIC4.36□□□□□ -1.71
SOX2P48431 RN7SKP286-201ENST00000410894 299 ntBASIC4.36□□□□□ -1.71
SOX2P48431 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX2P48431 AC004022.2-201ENST00000413824 193 ntBASIC4.36□□□□□ -1.71
SOX2P48431 MTCO1P21-201ENST00000416634 589 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 AL953862.1-201ENST00000423016 168 ntBASIC4.36□□□□□ -1.71
SOX2P48431 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 AC005033.1-201ENST00000428904 813 ntBASIC4.36□□□□□ -1.71
SOX2P48431 BMS1P19-201ENST00000433925 393 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 RN7SL809P-201ENST00000482040 297 ntBASIC4.36□□□□□ -1.71
SOX2P48431 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX2P48431 RNA5SP216-201ENST00000516111 123 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 AC012339.2-201ENST00000523996 453 ntBASIC4.36□□□□□ -1.71
SOX2P48431 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 DEFB131D-201ENST00000526803 184 ntBASIC4.36□□□□□ -1.71
SOX2P48431 OR5M2P-201ENST00000529003 936 ntBASIC4.36□□□□□ -1.71
SOX2P48431 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 AC022404.1-201ENST00000555320 273 ntBASIC4.36□□□□□ -1.71
SOX2P48431 PSMB7P1-201ENST00000556349 514 ntBASIC4.36□□□□□ -1.71
SOX2P48431 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX2P48431 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX2P48431 PCMTD1P2-201ENST00000565017 355 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.36□□□□□ -1.71
SOX2P48431 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX2P48431 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 AC090181.2-201ENST00000602975 672 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 TAS2R6P-201ENST00000605022 826 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AC239868.4-201ENST00000608318 671 ntBASIC4.36□□□□□ -1.71
SOX2P48431 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 AC010678.1-201ENST00000614118 713 ntBASIC4.36□□□□□ -1.71
SOX2P48431 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX2P48431 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
SOX2P48431 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
SOX2P48431 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.36□□□□□ -1.71
SOX2P48431 AC009643.2-201ENST00000603543 1448 ntBASIC4.36□□□□□ -1.71
SOX2P48431 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 MAPK10-320ENST00000641462 6696 ntBASIC4.36□□□□□ -1.71
SOX2P48431 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
SOX2P48431 AC104118.1-201ENST00000607625 1589 ntBASIC4.36□□□□□ -1.71
SOX2P48431 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.36□□□□□ -1.71
SOX2P48431 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 XPOTP1-201ENST00000443317 2398 ntBASIC4.35□□□□□ -1.71
SOX2P48431 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 AL079343.1-201ENST00000572358 1771 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL118496.1-201ENST00000440201 1812 ntBASIC4.35□□□□□ -1.71
SOX2P48431 MTND5P29-201ENST00000458676 1807 ntBASIC4.35□□□□□ -1.71
SOX2P48431 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 AP000756.2-201ENST00000624168 2567 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC107081.3-201ENST00000612715 2034 ntBASIC4.35□□□□□ -1.71
SOX2P48431 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SOX2P48431 SNRPEP3-201ENST00000338402 276 ntBASIC4.35□□□□□ -1.71
SOX2P48431 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 RNY3P10-201ENST00000384764 102 ntBASIC4.35□□□□□ -1.71
SOX2P48431 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
SOX2P48431 AL078604.1-201ENST00000404609 466 ntBASIC4.35□□□□□ -1.71
SOX2P48431 RN7SKP125-201ENST00000410481 302 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 AC092647.1-201ENST00000420654 287 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC093655.2-201ENST00000425735 631 ntBASIC4.35□□□□□ -1.71
SOX2P48431 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
SOX2P48431 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 LARP1BP3-201ENST00000437229 869 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.35□□□□□ -1.71
SOX2P48431 MTND4P6-201ENST00000438297 472 ntBASIC4.35□□□□□ -1.71
SOX2P48431 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC092427.1-201ENST00000439177 601 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL512286.1-201ENST00000439244 400 ntBASIC4.35□□□□□ -1.71
SOX2P48431 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.35□□□□□ -1.71
SOX2P48431 AP000281.1-201ENST00000444036 316 ntBASIC4.35□□□□□ -1.71
SOX2P48431 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.35□□□□□ -1.71
SOX2P48431 CDC27P1-201ENST00000445384 715 ntBASIC4.35□□□□□ -1.71
SOX2P48431 MTCO1P48-201ENST00000448024 1096 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.35□□□□□ -1.71
SOX2P48431 AL645937.3-201ENST00000453647 936 ntBASIC4.35□□□□□ -1.71
SOX2P48431 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms