Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXA13P31271 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA13P31271 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA13P31271 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXA13P31271 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXA13P31271 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXA13P31271 DPRXP4-201ENST00000578053 568 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXA13P31271 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 MIR5684-201ENST00000585074 65 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AL606834.3-201ENST00000602615 496 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXA13P31271 AC099676.1-201ENST00000608886 657 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC093673.2-201ENST00000609674 331 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXA13P31271 OR5BE1P-202ENST00000641168 1176 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 AC021242.1-201ENST00000507315 2035 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 ERCC6-202ENST00000374127 1782 ntBASIC4.68□□□□□ -1.66
HOXA13P31271 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 AC046144.1-201ENST00000478559 1853 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC104118.1-201ENST00000607625 1589 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 RNU6-146P-201ENST00000384602 108 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXA13P31271 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 OR5AW1P-201ENST00000426334 1006 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA13P31271 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA13P31271 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA13P31271 RNU7-140P-201ENST00000459546 60 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 RPL7P1-201ENST00000468161 747 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 RPL7P9-201ENST00000468715 747 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC091959.2-201ENST00000477363 321 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 AC010460.2-201ENST00000509054 677 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 RPL7L1P13-201ENST00000511702 739 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA13P31271 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.67□□□□□ -1.66
HOXA13P31271 AL442163.2-201ENST00000553912 710 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXA13P31271 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.67□□□□□ -1.66
HOXA13P31271 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.67□□□□□ -1.66
HOXA13P31271 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 AL022067.1-201ENST00000602426 454 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.67□□□□□ -1.66
HOXA13P31271 AC069431.2-201ENST00000604149 1099 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC114878.2-201ENST00000604863 1251 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 AC018754.1-201ENST00000607486 925 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 MIR6868-201ENST00000611215 58 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AL050303.3-201ENST00000613704 284 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AC092608.3-201ENST00000625017 386 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 AL451142.2-201ENST00000429076 2090 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HOXA13P31271 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 NSRP1P1-201ENST00000444067 1693 ntBASIC4.67□□□□□ -1.66
HOXA13P31271 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HOXA13P31271 Z95327.2-201ENST00000414579 1873 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AL445437.1-201ENST00000623157 3087 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 MTCO1P6-201ENST00000481192 1384 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA13P31271 PHKBP1-201ENST00000450951 1951 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AC105074.1-201ENST00000623380 3095 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 RN7SKP247-201ENST00000411094 308 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 BTF3P8-201ENST00000414577 526 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 RPL7P4-203ENST00000430239 730 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 RPS20P1-201ENST00000434853 354 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA13P31271 AC234064.1-201ENST00000436312 247 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 RPL12P46-201ENST00000436610 195 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 ELOCP11-201ENST00000436690 332 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC4.66□□□□□ -1.66
HOXA13P31271 ELOCP16-201ENST00000444494 332 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA13P31271 CDC42P1-201ENST00000456658 548 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 RPS4XP15-201ENST00000489210 795 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.66□□□□□ -1.66
HOXA13P31271 AC021146.3-201ENST00000511911 260 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AC104417.1-201ENST00000523974 751 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AP001372.4-201ENST00000524889 472 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HOXA13P31271 AC124293.1-201ENST00000530034 493 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 LRRC6P1-201ENST00000532188 885 ntBASIC4.66□□□□□ -1.66
HOXA13P31271 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.66□□□□□ -1.66
HOXA13P31271 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms