Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 AL121886.1-201ENST00000358609 435 ntBASIC5.33□□□□□ -1.56
ATF4P18848 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
ATF4P18848 RNU6-1249P-201ENST00000363237 111 ntBASIC5.33□□□□□ -1.56
ATF4P18848 SNORA38B-201ENST00000363524 131 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.33□□□□□ -1.56
ATF4P18848 MIR152-201ENST00000385212 87 ntBASIC5.33□□□□□ -1.56
ATF4P18848 MT-TL1-201ENST00000386347 75 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RNU6-754P-201ENST00000391166 107 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 MRPL32P1-201ENST00000406301 247 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AL139100.1-201ENST00000408001 498 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC099535.1-201ENST00000408928 371 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RPL23AP38-201ENST00000423801 469 ntBASIC5.33□□□□□ -1.56
ATF4P18848 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF4P18848 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF4P18848 AL606489.2-201ENST00000433886 234 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AL604028.2-201ENST00000437848 788 ntBASIC5.33□□□□□ -1.56
ATF4P18848 CYCSP44-201ENST00000448560 313 ntBASIC5.33□□□□□ -1.56
ATF4P18848 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF4P18848 RPL36AP13-201ENST00000457490 317 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC5.33□□□□□ -1.56
ATF4P18848 BX323845.2-201ENST00000458382 234 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RN7SL306P-201ENST00000492941 296 ntBASIC5.33□□□□□ -1.56
ATF4P18848 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 STMN1P2-201ENST00000508435 439 ntBASIC5.33□□□□□ -1.56
ATF4P18848 SCARNA6-201ENST00000515982 265 ntBASIC5.33□□□□□ -1.56
ATF4P18848 RNU7-51P-201ENST00000516560 62 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF4P18848 IGHV1-14-201ENST00000523391 241 ntBASIC5.33□□□□□ -1.56
ATF4P18848 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF4P18848 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF4P18848 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC5.33□□□□□ -1.56
ATF4P18848 AC128657.1-201ENST00000549459 145 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.33□□□□□ -1.56
ATF4P18848 RN7SL131P-201ENST00000579043 256 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC005730.3-201ENST00000583067 366 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC060780.3-201ENST00000589464 80 ntBASIC5.33□□□□□ -1.56
ATF4P18848 GLUD1P4-201ENST00000590914 418 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC006272.2-201ENST00000594725 163 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AL589863.1-201ENST00000595383 631 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC090948.1-201ENST00000607464 549 ntBASIC5.33□□□□□ -1.56
ATF4P18848 MIR8082-201ENST00000612488 81 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC093838.1-201ENST00000613014 469 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 FRG1KP-201ENST00000623592 341 ntBASIC5.33□□□□□ -1.56
ATF4P18848 OR7E161P-202ENST00000641994 1033 ntBASIC5.33□□□□□ -1.56
ATF4P18848 AC009220.2-201ENST00000489759 1751 ntBASIC5.33□□□□□ -1.56
ATF4P18848 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
ATF4P18848 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.33□□□□□ -1.56
ATF4P18848 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
ATF4P18848 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF4P18848 DHX40P1-201ENST00000588725 1412 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AC100757.1-201ENST00000616872 1835 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF4P18848 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF4P18848 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATF4P18848 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF4P18848 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.32□□□□□ -1.56
ATF4P18848 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
ATF4P18848 AC108751.5-201ENST00000492880 1336 ntBASIC5.32□□□□□ -1.56
ATF4P18848 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF4P18848 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATF4P18848 HSPE1P11-201ENST00000339579 310 ntBASIC5.32□□□□□ -1.56
ATF4P18848 Y_RNA.38-201ENST00000362617 102 ntBASIC5.32□□□□□ -1.56
ATF4P18848 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 MIR1-2-201ENST00000384961 85 ntBASIC5.32□□□□□ -1.56
ATF4P18848 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
ATF4P18848 RNA5SP35-201ENST00000391257 129 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AL080315.1-201ENST00000406055 466 ntBASIC5.32□□□□□ -1.56
ATF4P18848 RPS4XP5-201ENST00000419038 768 ntBASIC5.32□□□□□ -1.56
ATF4P18848 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF4P18848 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.32□□□□□ -1.56
ATF4P18848 SDHC-204ENST00000432287 460 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
ATF4P18848 RPS20P5-201ENST00000434808 360 ntBASIC5.32□□□□□ -1.56
ATF4P18848 DDX3P2-201ENST00000446138 111 ntBASIC5.32□□□□□ -1.56
ATF4P18848 VNN3-210ENST00000450865 596 ntTSL 4 BASIC5.32□□□□□ -1.56
ATF4P18848 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC5.32□□□□□ -1.56
ATF4P18848 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.32□□□□□ -1.56
ATF4P18848 TREML3P-201ENST00000457327 501 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.32□□□□□ -1.56
ATF4P18848 AL445687.2-201ENST00000458156 728 ntBASIC5.32□□□□□ -1.56
ATF4P18848 RPS3AP50-201ENST00000487064 803 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AL591122.1-201ENST00000487348 492 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AC007686.1-201ENST00000488511 463 ntBASIC5.32□□□□□ -1.56
ATF4P18848 RN7SL776P-201ENST00000493390 268 ntBASIC5.32□□□□□ -1.56
ATF4P18848 AC023424.1-201ENST00000496058 459 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms