Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 AC090543.2-201ENST00000483963 348 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC004057.1-201ENST00000485827 348 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC3.86□□□□□ -1.79
COL11A1P12107 AC018442.3-201ENST00000523025 183 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 AC026333.2-201ENST00000542164 106 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 NCAPGP2-201ENST00000557911 754 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 BRDTP1-201ENST00000605735 677 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.86□□□□□ -1.79
COL11A1P12107 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.86□□□□□ -1.79
COL11A1P12107 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.86□□□□□ -1.79
COL11A1P12107 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
COL11A1P12107 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.86□□□□□ -1.79
COL11A1P12107 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
COL11A1P12107 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.86□□□□□ -1.79
COL11A1P12107 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
COL11A1P12107 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 RNA5SP235-201ENST00000365411 114 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 OR1AA1P-201ENST00000419597 916 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 RPL23AP69-201ENST00000431134 458 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 MTCO1P45-201ENST00000431457 267 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 AL121594.4-201ENST00000556211 1196 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.86□□□□□ -1.79
COL11A1P12107 AC015802.5-201ENST00000607478 399 ntBASIC3.86□□□□□ -1.79
COL11A1P12107 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.86□□□□□ -1.79
COL11A1P12107 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.86□□□□□ -1.79
COL11A1P12107 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL11A1P12107 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL11A1P12107 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
COL11A1P12107 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL11A1P12107 MRPS18BP2-201ENST00000434310 759 ntBASIC3.85□□□□□ -1.79
COL11A1P12107 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.85□□□□□ -1.79
COL11A1P12107 RN7SL594P-201ENST00000470590 287 ntBASIC3.85□□□□□ -1.79
COL11A1P12107 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
COL11A1P12107 APOOP4-201ENST00000513530 597 ntBASIC3.85□□□□□ -1.79
COL11A1P12107 MIR6852-201ENST00000621699 66 ntBASIC3.85□□□□□ -1.79
COL11A1P12107 AC005332.5-201ENST00000591222 2919 ntBASIC3.85□□□□□ -1.79
COL11A1P12107 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC3.85□□□□□ -1.79
COL11A1P12107 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
COL11A1P12107 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
COL11A1P12107 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.84□□□□□ -1.79
COL11A1P12107 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
COL11A1P12107 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
COL11A1P12107 AJ239321.1-201ENST00000424255 564 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.84□□□□□ -1.79
COL11A1P12107 RPS29P31-201ENST00000446147 164 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 AC069306.1-201ENST00000507006 843 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 RNA5SP341-201ENST00000516261 117 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 Vault.1-201ENST00000516474 102 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.84□□□□□ -1.79
COL11A1P12107 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.84□□□□□ -1.79
COL11A1P12107 AC022146.1-201ENST00000595307 847 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 YPEL5P2-201ENST00000605553 359 ntBASIC3.84□□□□□ -1.79
COL11A1P12107 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.84□□□□□ -1.79
COL11A1P12107 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
COL11A1P12107 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.84□□□□□ -1.79
COL11A1P12107 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
COL11A1P12107 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.84□□□□□ -1.79
COL11A1P12107 AC068647.1-201ENST00000489539 2265 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
COL11A1P12107 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 AL136116.1-201ENST00000403591 381 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.84□□□□□ -1.8
COL11A1P12107 OR4K6P-201ENST00000416478 897 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.84□□□□□ -1.8
COL11A1P12107 AL357552.1-201ENST00000445254 415 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 RN7SL863P-201ENST00000462370 296 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 RN7SL93P-201ENST00000463035 293 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 AL136126.1-201ENST00000473603 402 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 SYT14P1-201ENST00000481459 721 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.84□□□□□ -1.8
COL11A1P12107 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.84□□□□□ -1.8
COL11A1P12107 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.84□□□□□ -1.8
COL11A1P12107 ATP5A1P2-202ENST00000616464 443 ntBASIC3.84□□□□□ -1.8
COL11A1P12107 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.84□□□□□ -1.8
COL11A1P12107 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
COL11A1P12107 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL11A1P12107 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
COL11A1P12107 Y_RNA.510-201ENST00000384511 114 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 U3.19-201ENST00000390893 196 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.83□□□□□ -1.8
COL11A1P12107 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.83□□□□□ -1.8
COL11A1P12107 AC006989.1-201ENST00000427212 131 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.83□□□□□ -1.8
COL11A1P12107 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC3.83□□□□□ -1.8
COL11A1P12107 AP001486.1-201ENST00000463339 476 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.83□□□□□ -1.8
COL11A1P12107 SCARNA20.6-201ENST00000517251 106 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 BNIP3P38-201ENST00000601117 544 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 AC006539.2-201ENST00000601729 572 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.83□□□□□ -1.8
COL11A1P12107 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
COL11A1P12107 AC073869.7-201ENST00000640874 297 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 AC119674.1-212ENST00000641155 993 ntBASIC3.83□□□□□ -1.8
COL11A1P12107 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms