Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGN1P05114 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN1P05114 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN1P05114 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.36□□□□□ -1.87
HMGN1P05114 AC107294.3-201ENST00000609211 526 ntBASIC3.36□□□□□ -1.87
HMGN1P05114 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN1P05114 AC145207.9-201ENST00000623802 325 ntBASIC3.36□□□□□ -1.87
HMGN1P05114 AC092184.1-201ENST00000625042 715 ntBASIC3.36□□□□□ -1.87
HMGN1P05114 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN1P05114 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HMGN1P05114 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.35□□□□□ -1.87
HMGN1P05114 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HMGN1P05114 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGN1P05114 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN1P05114 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGN1P05114 RPS29P33-201ENST00000456717 146 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC006483.1-201ENST00000487308 313 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.35□□□□□ -1.87
HMGN1P05114 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGN1P05114 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.35□□□□□ -1.87
HMGN1P05114 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.35□□□□□ -1.87
HMGN1P05114 RNA5SP108-201ENST00000605921 117 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC034236.3-201ENST00000605999 461 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC079684.1-201ENST00000621405 437 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 AC112484.5-201ENST00000624189 228 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 OR52H1-202ENST00000641796 1061 ntBASIC3.35□□□□□ -1.87
HMGN1P05114 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HMGN1P05114 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HMGN1P05114 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.35□□□□□ -1.87
HMGN1P05114 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN1P05114 RLIMP1-201ENST00000339626 1680 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 CCT8P1-201ENST00000413611 1657 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
HMGN1P05114 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
HMGN1P05114 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HMGN1P05114 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 SNORA3.3-201ENST00000408712 125 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 OR8G2P-201ENST00000412796 908 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN1P05114 AL356095.1-201ENST00000417217 199 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGN1P05114 RPL17P36-201ENST00000420302 549 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN1P05114 RPS27AP12-201ENST00000429552 465 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN1P05114 NDUFB1P1-201ENST00000435191 180 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 RPL7P59-201ENST00000447700 943 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 ARPC3P2-201ENST00000457786 533 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC089999.1-201ENST00000460336 374 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC022034.3-201ENST00000471393 478 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGN1P05114 CYCSP20-201ENST00000473154 315 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 ACTG1P13-201ENST00000486987 1043 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 HMGB3P14-201ENST00000494195 599 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 HMGB1P21-201ENST00000502313 581 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC021146.5-201ENST00000503544 545 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN1P05114 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN1P05114 HMGB3P15-201ENST00000507326 574 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 SNORA31.9-201ENST00000516429 84 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 MRPL49P2-201ENST00000521066 465 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN1P05114 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HMGN1P05114 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN1P05114 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.34□□□□□ -1.87
HMGN1P05114 AC027281.1-201ENST00000574178 758 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN1P05114 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN1P05114 AL451074.6-201ENST00000608512 729 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN1P05114 AC121761.2-201ENST00000617300 689 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 MIR6730-201ENST00000622213 67 ntBASIC3.34□□□□□ -1.87
HMGN1P05114 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.34□□□□□ -1.87
HMGN1P05114 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.34□□□□□ -1.87
HMGN1P05114 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.34□□□□□ -1.87
HMGN1P05114 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.34□□□□□ -1.88
HMGN1P05114 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
HMGN1P05114 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.34□□□□□ -1.88
HMGN1P05114 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGN1P05114 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGN1P05114 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HMGN1P05114 RNA5SP235-201ENST00000365411 114 ntBASIC3.33□□□□□ -1.88
HMGN1P05114 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
HMGN1P05114 DYNLT3P1-201ENST00000378574 347 ntBASIC3.33□□□□□ -1.88
HMGN1P05114 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
HMGN1P05114 AL136116.1-201ENST00000403591 381 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms