Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
HLA-DQA1P01909 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 USP33-201ENST00000357428 4155 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 OR4K15-201ENST00000305051 1216 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 MIR585-201ENST00000384887 94 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 HYKK-202ENST00000408962 847 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC019070.1-201ENST00000415008 1024 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC105402.2-201ENST00000438503 358 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC074367.1-201ENST00000438685 1125 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 HMGB1P37-201ENST00000439613 609 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RPL36AP15-201ENST00000444514 266 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC068135.1-201ENST00000446164 246 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 PHBP16-201ENST00000446318 950 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 ANP32BP2-201ENST00000454525 545 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC007686.1-201ENST00000488511 463 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 OR5H4P-201ENST00000510851 923 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RN7SKP283-201ENST00000517197 270 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RN7SKP92-201ENST00000517266 244 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 COX6B1P6-201ENST00000522347 255 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 HYKK-203ENST00000563233 734 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC079148.1-201ENST00000565944 819 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC067852.4-201ENST00000590314 478 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AL390816.3-201ENST00000604527 1066 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 OR2BH1P-201ENST00000608850 864 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AL512506.1-201ENST00000613918 449 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RMST_10.1-201ENST00000616309 154 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AL713922.2-201ENST00000619384 716 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AC097460.3-201ENST00000623099 442 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 ASNSP1-204ENST00000641977 1664 ntBASIC2.97□□□□□ -1.93
HLA-DQA1P01909 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
HLA-DQA1P01909 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
HLA-DQA1P01909 AC104446.1-201ENST00000613728 1321 ntBASIC2.96□□□□□ -1.93
HLA-DQA1P01909 MFSD8-213ENST00000641134 1327 ntBASIC2.96□□□□□ -1.93
HLA-DQA1P01909 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL592148.3-201ENST00000608771 2646 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MTCO1P18-201ENST00000455518 1419 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC008033.1-201ENST00000216407 1162 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RNA5SP27-201ENST00000363839 119 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RNU6-398P-201ENST00000384143 109 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MIR192-201ENST00000384915 110 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 CYB5AP4-201ENST00000396692 399 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MIR937-201ENST00000401271 86 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RPS3AP23-201ENST00000401762 784 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MTCO3P31-201ENST00000405526 789 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 SNORA11F-201ENST00000408237 128 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC016769.2-201ENST00000414815 475 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL158050.1-201ENST00000416077 457 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL590139.1-201ENST00000416267 400 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 HMGB3P5-201ENST00000428894 612 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RPL7P32-201ENST00000457119 744 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 RNU7-170P-201ENST00000459303 61 ntBASIC2.96□□□□□ -1.94
HLA-DQA1P01909 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.96□□□□□ -1.94
HLA-DQA1P01909 MTND3P24-201ENST00000506306 329 ntBASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms