Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 RPL23AP59-201ENST00000399415 461 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC3.21□□□□□ -1.9
UPK1BO75841 TCEA1P4-201ENST00000415066 844 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC119751.6-201ENST00000416712 186 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AL356387.2-201ENST00000422272 243 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC012498.1-201ENST00000424037 437 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC008065.1-201ENST00000428525 348 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC009969.1-201ENST00000438726 172 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 MTCYBP31-201ENST00000438855 1122 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC114878.1-201ENST00000441166 358 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.21□□□□□ -1.9
UPK1BO75841 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
UPK1BO75841 RPS11P1-201ENST00000451072 473 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.21□□□□□ -1.9
UPK1BO75841 OR9M1P-201ENST00000459641 921 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AP000873.1-201ENST00000463987 400 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC084357.1-201ENST00000473404 255 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC090568.1-201ENST00000509499 856 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 RN7SKP141-201ENST00000516167 338 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 RNU6ATAC24P-201ENST00000516811 135 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 MIR2276-201ENST00000516886 89 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 HMGB1P23-201ENST00000518743 568 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPK1BO75841 AC004923.2-201ENST00000529649 369 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.21□□□□□ -1.9
UPK1BO75841 MIR3138-201ENST00000585238 82 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 AL161729.3-201ENST00000603533 673 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC015982.1-201ENST00000608113 465 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 MIR6868-201ENST00000611215 58 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 AC121761.2-201ENST00000617300 689 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 MIR6861-201ENST00000618657 64 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC3.21□□□□□ -1.9
UPK1BO75841 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPK1BO75841 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.21□□□□□ -1.9
UPK1BO75841 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
UPK1BO75841 USP8P1-201ENST00000494673 3183 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1BO75841 RNU6-1293P-201ENST00000384077 107 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 HMGB1P13-201ENST00000406019 642 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 MIR1282-201ENST00000408865 101 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 MRPS18BP2-201ENST00000434310 759 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 AC097499.1-201ENST00000444277 208 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1BO75841 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 RPS20P32-201ENST00000456044 356 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 RPS20P21-201ENST00000466859 343 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 AL132838.2-201ENST00000492041 314 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 RN7SL604P-201ENST00000492589 296 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 OR9N1P-202ENST00000494289 481 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1BO75841 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1BO75841 HIGD1AP10-201ENST00000527837 282 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 MTND5P21-201ENST00000531961 522 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1BO75841 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.2□□□□□ -1.9
UPK1BO75841 UBE2FP2-201ENST00000566646 462 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 MIR4737-201ENST00000583979 81 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1BO75841 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.2□□□□□ -1.9
UPK1BO75841 AL163642.2-201ENST00000604722 1019 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 AL355802.4-201ENST00000607635 548 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 RNU6-156P-201ENST00000621869 107 ntBASIC3.2□□□□□ -1.9
UPK1BO75841 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1BO75841 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.2□□□□□ -1.9
UPK1BO75841 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
UPK1BO75841 HSPA8P19-201ENST00000505359 1517 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
UPK1BO75841 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
UPK1BO75841 MTHFD2P2-201ENST00000407725 247 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AP000534.2-201ENST00000412729 568 ntBASIC3.19□□□□□ -1.9
UPK1BO75841 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms