Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC020914.6-201ENST00000594327 272 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC069307.1-201ENST00000602820 447 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 AC092354.1-201ENST00000606057 376 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC004492.1-201ENST00000607036 742 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC024560.3-201ENST00000608482 349 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AP000254.1-201ENST00000609934 520 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 AL121873.1-201ENST00000616013 524 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 AC009509.4-201ENST00000619202 509 ntBASIC4.97□□□□□ -1.61
VPS4BO75351 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4BO75351 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4BO75351 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.97□□□□□ -1.61
VPS4BO75351 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.96□□□□□ -1.61
VPS4BO75351 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VPS4BO75351 AC134882.1-201ENST00000603738 1676 ntBASIC4.96□□□□□ -1.61
VPS4BO75351 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 MTND5P29-201ENST00000458676 1807 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 Y_RNA.18-201ENST00000362461 102 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 U3.2-201ENST00000362981 210 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 RN7SKP113-201ENST00000363891 295 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VPS4BO75351 RN7SKP126-201ENST00000411143 300 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 TPMTP3-201ENST00000411928 735 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC092634.6-201ENST00000418558 192 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC009237.2-201ENST00000421358 284 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS4BO75351 MED14P1-201ENST00000430517 648 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC091390.1-201ENST00000433904 331 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 PPIAP13-201ENST00000434706 478 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 TRIM60P9Y-201ENST00000438459 816 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC241584.1-201ENST00000438469 1241 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 RPL7AP61-201ENST00000443410 636 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 MTCO1P19-201ENST00000443487 500 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 COX6CP2-201ENST00000444980 225 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 AL356981.1-201ENST00000454879 684 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 NF1P3-201ENST00000457709 450 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 snoU13.20-201ENST00000459180 104 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 RNA5SP103-201ENST00000459503 118 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AL672167.3-201ENST00000465951 960 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC092324.1-201ENST00000468671 324 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 AC068724.1-201ENST00000487100 792 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 AL117351.2-201ENST00000513571 157 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC022447.1-201ENST00000515358 464 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS4BO75351 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.96□□□□□ -1.62
VPS4BO75351 AC093519.1-201ENST00000566109 298 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 AC091488.1-201ENST00000604239 660 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC006270.3-201ENST00000605967 1036 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 AC006338.2-201ENST00000616864 791 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 AC015804.1-201ENST00000622935 435 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AL359715.5-201ENST00000623431 443 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 AC120349.2-201ENST00000625002 298 ntBASIC4.96□□□□□ -1.62
VPS4BO75351 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS4BO75351 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS4BO75351 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.96□□□□□ -1.62
VPS4BO75351 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
VPS4BO75351 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS4BO75351 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS4BO75351 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS4BO75351 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS4BO75351 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS4BO75351 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS4BO75351 LINC00561-201ENST00000565815 2738 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS4BO75351 AL121657.1-201ENST00000327215 531 ntBASIC4.95□□□□□ -1.62
VPS4BO75351 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms