Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SDC3O75056 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 HNRNPDP2-201ENST00000406475 478 ntBASIC4.02□□□□□ -1.77
SDC3O75056 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.02□□□□□ -1.77
SDC3O75056 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 TBCAP1-201ENST00000436520 327 ntBASIC4.02□□□□□ -1.77
SDC3O75056 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
SDC3O75056 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.02□□□□□ -1.77
SDC3O75056 AL451050.1-201ENST00000450126 415 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AC012158.1-204ENST00000483430 465 ntBASIC4.02□□□□□ -1.77
SDC3O75056 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.02□□□□□ -1.77
SDC3O75056 PRELID3BP7-201ENST00000503606 469 ntBASIC4.02□□□□□ -1.77
SDC3O75056 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.02□□□□□ -1.77
SDC3O75056 MTND2P7-201ENST00000521337 640 ntBASIC4.02□□□□□ -1.77
SDC3O75056 OR5AK3P-201ENST00000527486 1297 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.02□□□□□ -1.77
SDC3O75056 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.02□□□□□ -1.77
SDC3O75056 AP000919.1-202ENST00000581139 1264 ntBASIC4.02□□□□□ -1.77
SDC3O75056 MIR4444-1-201ENST00000581696 74 ntBASIC4.02□□□□□ -1.77
SDC3O75056 MIR4444-2-201ENST00000584390 74 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AC005255.1-201ENST00000593748 216 ntBASIC4.02□□□□□ -1.77
SDC3O75056 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.02□□□□□ -1.77
SDC3O75056 AC068790.5-201ENST00000602741 355 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AL451086.1-201ENST00000605596 223 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AC005972.3-201ENST00000606304 481 ntBASIC4.02□□□□□ -1.77
SDC3O75056 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.02□□□□□ -1.77
SDC3O75056 AC019278.1-201ENST00000623516 479 ntBASIC4.02□□□□□ -1.77
SDC3O75056 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.02□□□□□ -1.77
SDC3O75056 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.02□□□□□ -1.77
SDC3O75056 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.02□□□□□ -1.77
SDC3O75056 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.02□□□□□ -1.77
SDC3O75056 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.02□□□□□ -1.77
SDC3O75056 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SDC3O75056 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 AL139811.1-201ENST00000424779 2299 ntBASIC4.01□□□□□ -1.77
SDC3O75056 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC3O75056 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 RNA5SP391-201ENST00000363456 119 ntBASIC4.01□□□□□ -1.77
SDC3O75056 SNORD74.4-201ENST00000364129 80 ntBASIC4.01□□□□□ -1.77
SDC3O75056 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 PTGES3P2-201ENST00000407942 482 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 AC006946.1-201ENST00000429106 328 ntBASIC4.01□□□□□ -1.77
SDC3O75056 NANOGP6-201ENST00000429190 847 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC018644.1-201ENST00000429934 551 ntBASIC4.01□□□□□ -1.77
SDC3O75056 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.01□□□□□ -1.77
SDC3O75056 NDUFS5P3-201ENST00000450668 321 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 AC108145.1-201ENST00000503770 153 ntBASIC4.01□□□□□ -1.77
SDC3O75056 KRT19P6-201ENST00000510983 209 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC133963.2-201ENST00000513686 578 ntBASIC4.01□□□□□ -1.77
SDC3O75056 RN7SKP82-201ENST00000516786 223 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.01□□□□□ -1.77
SDC3O75056 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 MIR5684-201ENST00000585074 65 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 AC025946.2-201ENST00000603398 234 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC024220.1-201ENST00000603675 484 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC3O75056 AL592436.1-201ENST00000605135 558 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC007390.2-201ENST00000606229 3803 ntBASIC4.01□□□□□ -1.77
SDC3O75056 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.01□□□□□ -1.77
SDC3O75056 MIR6868-201ENST00000611215 58 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AL353726.1-201ENST00000614041 1000 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.01□□□□□ -1.77
SDC3O75056 AL138721.1-201ENST00000616756 179 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC243756.2-201ENST00000618406 463 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AL163051.2-201ENST00000618976 735 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC106730.3-201ENST00000624568 641 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SDC3O75056 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.01□□□□□ -1.77
SDC3O75056 AL049737.1-201ENST00000413920 1403 ntBASIC4.01□□□□□ -1.77
SDC3O75056 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC3O75056 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.01□□□□□ -1.77
SDC3O75056 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SDC3O75056 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
SDC3O75056 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4□□□□□ -1.77
SDC3O75056 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SDC3O75056 SNORA71.3-201ENST00000362582 128 ntBASIC4□□□□□ -1.77
SDC3O75056 RNA5SP124-201ENST00000362739 110 ntBASIC4□□□□□ -1.77
SDC3O75056 5S_rRNA.1-201ENST00000364415 116 ntBASIC4□□□□□ -1.77
SDC3O75056 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4□□□□□ -1.77
SDC3O75056 OR52E6-202ENST00000379946 954 ntBASIC4□□□□□ -1.77
SDC3O75056 MIR200C-201ENST00000384980 68 ntBASIC4□□□□□ -1.77
SDC3O75056 UBE2V1P11-201ENST00000411559 285 ntBASIC4□□□□□ -1.77
SDC3O75056 AC023128.2-201ENST00000420880 1223 ntBASIC4□□□□□ -1.77
SDC3O75056 AL606495.1-201ENST00000422100 813 ntBASIC4□□□□□ -1.77
SDC3O75056 MTND2P11-201ENST00000423638 648 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms