Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC000367.1-201ENST00000452711 1766 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SSSCA1O60232 AC092326.2-201ENST00000624772 1561 ntBASIC2.78□□□□□ -1.96
SSSCA1O60232 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.78□□□□□ -1.97
SSSCA1O60232 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.77□□□□□ -1.97
SSSCA1O60232 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SSSCA1O60232 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 MIR148B-201ENST00000362252 99 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 U3.11-201ENST00000364476 212 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.77□□□□□ -1.97
SSSCA1O60232 HMGB3P23-201ENST00000414981 585 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC006960.1-201ENST00000419980 153 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 B3GNT2P1-201ENST00000434960 952 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 NPM1P48-201ENST00000436002 853 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.77□□□□□ -1.97
SSSCA1O60232 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.77□□□□□ -1.97
SSSCA1O60232 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.77□□□□□ -1.97
SSSCA1O60232 TVP23BP2-201ENST00000455082 615 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 RPL7P19-201ENST00000469948 618 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 RPS29P22-201ENST00000472363 168 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC037198.2-201ENST00000478845 733 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC011037.1-201ENST00000483964 558 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AL139099.1-201ENST00000497398 403 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC025260.1-201ENST00000548858 430 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC025884.1-201ENST00000556034 378 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AL049844.2-201ENST00000604280 628 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC011816.2-201ENST00000607089 556 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 AC092653.1-201ENST00000608509 531 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.77□□□□□ -1.97
SSSCA1O60232 AC092079.1-201ENST00000558620 1985 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SSSCA1O60232 MFSD8-233ENST00000641482 4860 ntBASIC2.77□□□□□ -1.97
SSSCA1O60232 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSSCA1O60232 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 ZNF826P-207ENST00000622273 1910 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SSSCA1O60232 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AL121657.1-201ENST00000327215 531 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSSCA1O60232 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SSSCA1O60232 SNORA58B-201ENST00000364259 136 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 AC136624.1-201ENST00000400791 413 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 RNA5SP44-201ENST00000410446 133 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SSSCA1O60232 OR8F1P-201ENST00000425243 930 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 RPL18P10-201ENST00000425606 538 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 OR4F13P-201ENST00000428478 931 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.76□□□□□ -1.97
SSSCA1O60232 NEK4P1-201ENST00000433383 879 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.76□□□□□ -1.97
SSSCA1O60232 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AP000873.1-201ENST00000463987 400 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AC093267.1-201ENST00000489176 961 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 RANP9-201ENST00000519957 271 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 AC245166.1-201ENST00000521012 253 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC2.76□□□□□ -1.97
SSSCA1O60232 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.76□□□□□ -1.97
SSSCA1O60232 RMST-202ENST00000541282 2099 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 MTND5P27-201ENST00000428871 1720 ntBASIC2.76□□□□□ -1.97
SSSCA1O60232 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSSCA1O60232 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
SSSCA1O60232 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SSSCA1O60232 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SSSCA1O60232 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.75□□□□□ -1.97
SSSCA1O60232 AP001148.1-201ENST00000624124 2359 ntBASIC2.75□□□□□ -1.97
SSSCA1O60232 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SSSCA1O60232 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms